RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 APOA5Q6Q788 366 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 CACNA2D4Q7Z3S7 1137 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 WDR5BQ86VZ2 330 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 ZNF654Q8IZM8 581 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 MBOAT7Q96N66 472 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 SPZ1Q9BXG8 430 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 VPS45Q9NRW7 570 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 KCNH3Q9ULD8 1083 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 PCDHGA5Q9Y5G8 931 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 CNTNAP2Q9UHC6 1331 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 COL4A2P08572 1712 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 PDCD11Q14690 1871 aaKnown RBP18.88■□□□□ 0.61
NEK9-204ENST00000554258 CCDC69A6NI79 296 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 C8AP07357 584 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 CHRNB1P11230 501 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 CEACAM1P13688 526 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 RAP1GAPP47736 663 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 GRM2Q14416 872 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 USP41Q3LFD5 358 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 PABPC1LQ4VXU2 614 aaKnown RBP18.88■□□□□ 0.61
NEK9-204ENST00000554258 TCEAL6Q6IPX3 200 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 CATIPQ7Z7H3 387 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 COLGALT2Q8IYK4 626 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 TCEAL3Q969E4 200 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 MCRS1Q96EZ8 462 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 ZNF274Q96GC6 653 aaPredicted RBP18.88■□□□□ 0.61
NEK9-204ENST00000554258 FAM167AQ96KS9 214 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 SLC12A7Q9Y666 1083 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 PIAS3Q9Y6X2 628 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 CACNA1EQ15878 2313 aa18.88■□□□□ 0.61
NEK9-204ENST00000554258 TENM4Q6N022 2769 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 CELSR3Q9NYQ7 3312 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 F8W810 466 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 HYAL3O43820 417 aaPredicted RBP18.87■□□□□ 0.61
NEK9-204ENST00000554258 HOXA9P31269 272 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 FGD1P98174 961 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 NID2Q14112 1375 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 TANGO2Q6ICL3 276 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 NFXL1Q6ZNB6 911 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 KBTBD6Q86V97 674 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 MYO18BQ8IUG5 2567 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 ADAM32Q8TC27 787 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 ELSPBP1Q96BH3 223 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 HCFC1R1Q9NWW0 138 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 MSRB2Q9Y3D2 182 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 MRPS23Q9Y3D9 190 aaKnown RBP18.87■□□□□ 0.61
NEK9-204ENST00000554258 KALRNO60229 2985 aa18.87■□□□□ 0.61
NEK9-204ENST00000554258 ASCC3Q8N3C0 2202 aaKnown RBP18.86■□□□□ 0.61
NEK9-204ENST00000554258 PCNX2A6NKB5 2137 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 KLF18A0A0U1RQI7 1052 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 CYSRT1A8MQ03 144 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 MEIS1O00470 390 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 NR1I2O75469 434 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 RPP40O75818 363 aaKnown RBP18.86■□□□□ 0.61
NEK9-204ENST00000554258 CALM1P0DP23 149 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 CALM2P0DP24 149 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 CALM3P0DP25 149 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 PDIA3P30101 505 aaKnown RBP18.86■□□□□ 0.61
NEK9-204ENST00000554258 PTGDRQ13258 359 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 LRRC32Q14392 662 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 COL28A1Q2UY09 1125 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 CATSPER4Q7RTX7 472 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 PROSER1Q86XN7 944 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 GPR65Q8IYL9 337 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 IRF7Q92985 503 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 BBC3Q96PG8 261 aaPredicted RBP18.86■□□□□ 0.61
NEK9-204ENST00000554258 TRMT61BQ9BVS5 477 aaKnown RBP18.86■□□□□ 0.61
NEK9-204ENST00000554258 INO80BQ9C086 356 aaPredicted RBP18.86■□□□□ 0.61
NEK9-204ENST00000554258 GDE1Q9NZC3 331 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 GABBR1Q9UBS5 961 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 TCEAL9Q9UHQ7 104 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 TPCN1Q9ULQ1 816 aa18.86■□□□□ 0.61
NEK9-204ENST00000554258 A0A087WZ62 844 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 HOXA6P31267 233 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 CDC42EP1Q00587 391 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 SYNE3Q6ZMZ3 975 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 MRPL10Q7Z7H8 261 aaKnown RBP18.85■□□□□ 0.61
NEK9-204ENST00000554258 FANCBQ8NB91 859 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 FDXACB1Q9BRP7 624 aaPredicted RBP18.85■□□□□ 0.61
NEK9-204ENST00000554258 COLEC11Q9BWP8 271 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 GPR62Q9BZJ7 368 aa18.85■□□□□ 0.61
NEK9-204ENST00000554258 ZBTB43O43298 467 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 PSAPP07602 524 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 CCDC192P0DO97 292 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 CSRP1P21291 193 aaKnown RBP18.84■□□□□ 0.61
NEK9-204ENST00000554258 CCNE1P24864 410 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 ZNF76P36508 570 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 FUT10Q6P4F1 479 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
NEK9-204ENST00000554258 Q6ZS52 159 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 RBM12Q9NTZ6 932 aaKnown RBP18.84■□□□□ 0.61
NEK9-204ENST00000554258 DNMT3BQ9UBC3 853 aaKnown RBP18.84■□□□□ 0.61
NEK9-204ENST00000554258 KLK13Q9UKR3 277 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 LIMCH1Q9UPQ0 1083 aa18.84■□□□□ 0.61
NEK9-204ENST00000554258 APC2O95996 2303 aa18.83■□□□□ 0.61
NEK9-204ENST00000554258 EML5Q05BV3 1969 aa18.83■□□□□ 0.61
NEK9-204ENST00000554258 DHX15O43143 795 aaKnown RBP18.83■□□□□ 0.6
NEK9-204ENST00000554258 SMARCA1P28370 1054 aa18.83■□□□□ 0.6
NEK9-204ENST00000554258 HOXC13P31276 330 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms