RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 FAM228AQ86W67 206 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 CNGA4Q8IV77 575 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 RDH13Q8NBN7 331 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 SPC24Q8NBT2 197 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 ZSWIM2Q8NEG5 633 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 FNBP1Q96RU3 617 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 TTYH3Q9C0H2 523 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 TMEM8AQ9HCN3 771 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 RBAKQ9NYW8 714 aaPredicted RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 FBXL5Q9UKA1 691 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 PIN4Q9Y237 131 aaKnown RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 SIK3Q9Y2K2 1263 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 KIAA0100Q14667 2235 aaKnown RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 A0A1W2PQJ5 194 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 LRRIQ3A6PVS8 624 aaPredicted RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 PARNO95453 639 aaKnown RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 MYCP01106 439 aaPredicted RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 CD4P01730 458 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 CTSHP09668 335 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 TRIM49P0CI25 452 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 TRIM49CP0CI26 452 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 STAG3L1P0CL83 205 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 HARSP12081 509 aaKnown RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 CKBP12277 381 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 SELPP16109 830 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 RFX1P22670 979 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 GRM5P41594 1212 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 ACOT2P49753 483 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 RAB27AP51159 221 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 MYL7Q01449 175 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 EXOC3L4Q17RC7 722 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 C1orf220Q5T0J3 134 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 KRT39Q6A163 491 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 GBP6Q6ZN66 633 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 ZBTB33Q86T24 672 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 PPFIBP1Q86W92 1011 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 NT5DC4Q86YG4 428 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 WDR49Q8IV35 697 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 CD302Q8IX05 232 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 PLEKHO2Q8TD55 490 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 CPB2Q96IY4 423 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 TSPAN18Q96SJ8 248 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 CGRRF1Q99675 332 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 CCDC94Q9BW85 323 aaPredicted RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 EDEM3Q9BZQ6 932 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 TRPV6Q9H1D0 765 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 ASB7Q9H672 318 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 RPF1Q9H9Y2 349 aaKnown RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 PLCB1Q9NQ66 1216 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 GCNT4Q9P109 453 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 ST3GAL5Q9UNP4 418 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 COQ4Q9Y3A0 265 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 NOC2LQ9Y3T9 749 aaKnown RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 BRCA2P51587 3418 aa8.3□□□□□ -1.08
TDP1-209ENST00000554180 TRIP12Q14669 1992 aaPredicted RBP8.3□□□□□ -1.08
TDP1-209ENST00000554180 DCDC2CA8MYV0 355 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 AKR1B15C9JRZ8 316 aaPredicted RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 NRDCO43847 1150 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 NPTXRO95502 500 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 GYPCP04921 128 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 DLATP10515 647 aaKnown RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 FGFR4P22455 802 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 GCLMP48507 274 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 DLG4P78352 724 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 PPP3CAQ08209 521 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 PAK2Q13177 524 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 LPIN1Q14693 890 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 ARID5BQ14865 1188 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 ENOX2Q16206 610 aaKnown RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 ZACNQ401N2 412 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 CBWD6Q4V339 395 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 EPC2Q52LR7 807 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 CBWD3Q5JTY5 395 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 CBWD5Q5RIA9 395 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 ZBTB41Q5SVQ8 909 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 ZNF618Q5T7W0 954 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 SMYD5Q6GMV2 418 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 TRIM65Q6PJ69 517 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 TRAF7Q6Q0C0 670 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 SLC39A5Q6ZMH5 540 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 C15orf39Q6ZRI6 1047 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 CCDC186Q7Z3E2 898 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 THNSL1Q8IYQ7 743 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 HACE1Q8IYU2 909 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 ZNF397Q8NF99 534 aaPredicted RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 NEK11Q8NG66 645 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 CCDC127Q96BQ5 260 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 TRIM44Q96DX7 344 aaPredicted RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 ACAP3Q96P50 834 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 TRIM6Q9C030 488 aaPredicted RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 TMEM117Q9H0C3 514 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 NUCKS1Q9H1E3 243 aaKnown RBP8.29□□□□□ -1.08
TDP1-209ENST00000554180 PLEKHA5Q9HAU0 1116 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 PDE11AQ9HCR9 933 aa8.29□□□□□ -1.08
TDP1-209ENST00000554180 ERVK-5Q9HDB9 667 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms