RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 NSUN6Q8TEA1 469 aaKnown RBP4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 CDK5RAP3Q96JB5 506 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 GPHA2Q96T91 129 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 CGRRF1Q99675 332 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 MYBBP1AQ9BQG0 1328 aaKnown RBP4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 SEC61A2Q9H9S3 476 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 MSL2Q9HCI7 577 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 FEZ2Q9UHY8 353 aaPredicted RBP4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 RUVBL1Q9Y265 456 aaKnown RBP4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 SIK3Q9Y2K2 1263 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 PCDHB1Q9Y5F3 818 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 NR2E3Q9Y5X4 410 aa4.59□□□□□ -1.67
EFCAB11-204ENST00000553871 UBE2QL1A1L167 161 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 B3GALT2O43825 422 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 ALDH2P05091 517 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 CR2P20023 1033 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 CNR2P34972 360 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 MAP2K6P52564 334 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 CREMQ03060 361 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 PTH1RQ03431 593 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 TARDBPQ13148 414 aaKnown RBP eCLIP4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 NOGQ13253 232 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 SP140Q13342 867 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 HDAC1Q13547 482 aaPredicted RBP4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 LLGL1Q15334 1064 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 SRGAP1Q7Z6B7 1085 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 FEZF2Q8TBJ5 459 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 CASKIN2Q8WXE0 1202 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 STON2Q8WXE9 905 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 CFHR4Q92496 578 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 OR14A2Q96R54 314 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 LMBRD1Q9NUN5 540 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 HDAC5Q9UQL6 1122 aa4.58□□□□□ -1.68
EFCAB11-204ENST00000553871 PMS2P1A4D2B8 440 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 LRRC14BA6NHZ5 514 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 H3BUI4 141 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 TUSC2O75896 110 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 RPS19P39019 145 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 FLT3LGP49771 235 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 PURAQ00577 322 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 DSC2Q02487 901 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 SAFB2Q14151 953 aaKnown RBP eCLIP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 KHDC1Q4VXA5 237 aaKnown RBP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 SLFN13Q68D06 897 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 OVCH2Q7RTZ1 564 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 ZNF572Q7Z3I7 529 aaPredicted RBP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 HEATR3Q7Z4Q2 680 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 SH2D3CQ8N5H7 860 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 LILRA3Q8N6C8 439 aaPredicted RBP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 KLHDC4Q8TBB5 520 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 TMEM176AQ96HP8 235 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 FAM167AQ96KS9 214 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 SAMD11Q96NU1 681 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 VRK1Q99986 396 aaPredicted RBP4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 PLA2G12BQ9BX93 195 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 B3GNT5Q9BYG0 378 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 TMEM60Q9H2L4 133 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 NELFAQ9H3P2 528 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 ZCCHC4Q9H5U6 513 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 ARMT1Q9H993 441 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 ARNT2Q9HBZ2 717 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 CNNM1Q9NRU3 951 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 CALCOCO1Q9P1Z2 691 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 ABCF2Q9UG63 623 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 FAM50BQ9Y247 325 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 PCDHA3Q9Y5H8 950 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 ACTL7AQ9Y615 435 aa4.57□□□□□ -1.68
EFCAB11-204ENST00000553871 NPEPPSL1A6NEC2 478 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 CAPN8A6NHC0 703 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 TPP1O14773 563 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 ZBED1O96006 694 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 AMY1AP04745 511 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 ATP5JP18859 108 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 GNAT2P19087 354 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 FPR1P21462 350 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 PCSK1P29120 753 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 GUCY1A2P33402 732 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 HK3P52790 923 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 CACNB3P54284 484 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 EPHB4P54760 987 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 CTXN1P60606 82 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 FAM193AP78312 1265 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 ADAM8P78325 824 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 TLE1Q04724 770 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 MTM1Q13496 603 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 BRD3Q15059 726 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 KIAA0753Q2KHM9 967 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 MAP9Q49MG5 647 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 ANO6Q4KMQ2 910 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 COBLL1Q53SF7 1204 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 UBXN11Q5T124 520 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 AFMIDQ63HM1 303 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 FAM111BQ6SJ93 734 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 ADGRE4PQ86SQ3 457 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 TAX1BP1Q86VP1 789 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 ZGPATQ8N5A5 531 aaKnown RBP4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 IFI44Q8TCB0 444 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 SLC35A4Q96G79 324 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 MRGPRX4Q96LA9 322 aa4.56□□□□□ -1.68
EFCAB11-204ENST00000553871 SARGQ9BW04 601 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms