RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MRPL38Q96DV4 380 aaKnown RBP24.98■■□□□ 1.59
TDP1-206ENST00000553569 PAGE5Q96GU1 130 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 CCDC94Q9BW85 323 aaPredicted RBP24.98■■□□□ 1.59
TDP1-206ENST00000553569 OLFML3Q9NRN5 406 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 DDHD2O94830 711 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 POU3F3P20264 500 aaPredicted RBP24.97■■□□□ 1.59
TDP1-206ENST00000553569 GRM5P41594 1212 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 ALDH7A1P49419 539 aaKnown RBP24.97■■□□□ 1.59
TDP1-206ENST00000553569 CNNM4Q6P4Q7 775 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 SPPL3Q8TCT6 385 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 HVCN1Q96D96 273 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 TSHZ2Q9NRE2 1034 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 SPG21Q9NZD8 308 aa24.97■■□□□ 1.59
TDP1-206ENST00000553569 CLDN3O15551 220 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 PPP1R37O75864 691 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 PIGRP01833 764 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 PPM1AP35813 382 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 SLC11A1P49279 550 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 MCL1Q07820 350 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 GRIK3Q13003 919 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 SEZ6Q53EL9 994 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 UNC13DQ70J99 1090 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 SLC39A11Q8N1S5 342 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 GSTCDQ8NEC7 633 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 POF1BQ8WVV4 589 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 HAPLN2Q9GZV7 340 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 LMAN2LQ9H0V9 348 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 CXCL16Q9H2A7 254 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 IKZF4Q9H2S9 585 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 LMCD1Q9NZU5 365 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 TRIP11Q15643 1979 aa24.96■■□□□ 1.59
TDP1-206ENST00000553569 CITO14578 2027 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 GALTP07902 379 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 DNAJB1P25685 340 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 YARSP54577 528 aaKnown RBP24.95■■□□□ 1.58
TDP1-206ENST00000553569 KCNA1Q09470 495 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 L1TD1Q5T7N2 865 aaKnown RBP24.95■■□□□ 1.58
TDP1-206ENST00000553569 SLC39A4Q6P5W5 647 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 ACCSQ96QU6 501 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 STRA6Q9BX79 667 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 PCDHB13Q9Y5F0 798 aa24.95■■□□□ 1.58
TDP1-206ENST00000553569 TISP43B9A030 160 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 PTGESO14684 152 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 ZNF202O95125 648 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 ALCAMQ13740 583 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 TIGD5Q53EQ6 642 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 GLRA4Q5JXX5 417 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 FAM26FQ5R3K3 315 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 TMEM173Q86WV6 379 aaPredicted RBP24.94■■□□□ 1.58
TDP1-206ENST00000553569 GLIS3Q8NEA6 775 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 TMEM169Q96HH4 297 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 ACAP3Q96P50 834 aa24.94■■□□□ 1.58
TDP1-206ENST00000553569 PRG3Q9Y2Y8 225 aaPredicted RBP24.94■■□□□ 1.58
TDP1-206ENST00000553569 ANKRD63C9JTQ0 380 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 PRPF6O94906 941 aaKnown RBP24.93■■□□□ 1.58
TDP1-206ENST00000553569 PRR29P0C7W0 189 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 OR1G1P47890 313 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 PLCB3Q01970 1234 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 DSC1Q08554 894 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 SKIV2LQ15477 1246 aaKnown RBP24.93■■□□□ 1.58
TDP1-206ENST00000553569 KRBA2Q6ZNG9 492 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 COLGALT2Q8IYK4 626 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 BCL7CQ8WUZ0 217 aaPredicted RBP24.93■■□□□ 1.58
TDP1-206ENST00000553569 TMEM175Q9BSA9 504 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 TOPORSQ9NS56 1045 aaPredicted RBP24.93■■□□□ 1.58
TDP1-206ENST00000553569 EXOC7Q9UPT5 735 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 FAN1Q9Y2M0 1017 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 TRANK1O15050 2925 aa24.93■■□□□ 1.58
TDP1-206ENST00000553569 THP07101 528 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 KRT17Q04695 432 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 UBE3AQ05086 875 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 CAMK1Q14012 370 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 STXBP4Q6ZWJ1 553 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 SYCP3Q8IZU3 236 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 SNX27Q96L92 541 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 MSTO1Q9BUK6 570 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 TLR9Q9NR96 1032 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 CACNG4Q9UBN1 327 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 PCDHGC5Q9Y5F6 944 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 MYO7AQ13402 2215 aa24.92■■□□□ 1.58
TDP1-206ENST00000553569 PVALEFA0A1B0GWK0 134 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 CARNS1A5YM72 827 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 NRP1O14786 923 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 ALDH2P05091 517 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 IRS1P35568 1242 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 ZBTB41Q5SVQ8 909 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 IGSF21Q96ID5 467 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 IPO9Q96P70 1041 aaKnown RBP24.91■■□□□ 1.58
TDP1-206ENST00000553569 NSUN3Q9H649 340 aaKnown RBP24.91■■□□□ 1.58
TDP1-206ENST00000553569 EXOC1Q9NV70 894 aa24.91■■□□□ 1.58
TDP1-206ENST00000553569 PUF60Q9UHX1 559 aaKnown RBP24.91■■□□□ 1.58
TDP1-206ENST00000553569 A0A0B4J269 797 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 CASTOR2A6NHX0 329 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 OGTO15294 1046 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 CXCL8P10145 99 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 TNFSF9P41273 254 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 EHHADHQ08426 723 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 TUSC3Q13454 348 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 TCEAL5Q5H9L2 206 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 FMR1NBQ8N0W7 255 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms