RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 MCM7P33993 719 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 ABHD18Q0P651 414 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 VPS72Q15906 364 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 ADRM1Q16186 407 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 MUM1L1Q5H9M0 696 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 FAM180AQ6UWF9 173 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 PDZD4Q76G19 769 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-217ENST00000553287 DOK3Q7L591 496 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 OR52N2Q8NGI0 321 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 ACE2Q9BYF1 805 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-217ENST00000553287 SLC5A4Q9NY91 659 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 TRPS1Q9UHF7 1281 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 SORCS3Q9UPU3 1222 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 KIF21BO75037 1637 aa6.43□□□□□ -1.38
ATXN3-217ENST00000553287 GSPT1P15170 499 aaKnown RBP6.42□□□□□ -1.38
ATXN3-217ENST00000553287 CRHR1P34998 444 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 KLF10Q13118 480 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 ANKS6Q68DC2 871 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 GPRIN1Q7Z2K8 1008 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 ZNF483Q8TF39 744 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-217ENST00000553287 ZNF480Q8WV37 535 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 PCED1AQ9H1Q7 454 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 GREM2Q9H772 168 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 ATP8A1Q9Y2Q0 1164 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 MAP3K4Q9Y6R4 1608 aa6.42□□□□□ -1.38
ATXN3-217ENST00000553287 GLI2P10070 1586 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 TBKBP1A7MCY6 615 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 GRXCR1A8MXD5 290 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 RPS6KA4O75676 772 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 RECQL4O94761 1208 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 PTPN7P35236 360 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 ERVK-21P61565 698 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 MFSD14BQ5SR56 506 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 Q6ZVL8 140 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 FAM193BQ96PV7 902 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 NDC1Q9BTX1 674 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 MRIQ9BWK5 157 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 PUS7LQ9H0K6 701 aaKnown RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 RBM12Q9NTZ6 932 aaKnown RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 CCM2LQ9NUG4 571 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 EIF2B4Q9UI10 523 aaKnown RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 ING1Q9UK53 422 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-217ENST00000553287 ZBTB21Q9ULJ3 1066 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 CLCA2Q9UQC9 943 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 WASHC2AQ641Q2 1341 aa6.41□□□□□ -1.38
ATXN3-217ENST00000553287 EPRSP07814 1512 aaKnown RBP6.4□□□□□ -1.38
ATXN3-217ENST00000553287 KIAA0586Q9BVV6 1533 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 ADCY6O43306 1168 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 MAKP20794 623 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 HMGA2P52926 109 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 SLC5A3P53794 718 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 PER3P56645 1201 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 KLF1Q13351 362 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-217ENST00000553287 NOMO1Q15155 1222 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 ANO4Q32M45 955 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 EFCAB12Q6NXP0 572 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 ZNF276Q8N554 614 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 CNTD1Q8N815 330 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 REPS2Q8NFH8 660 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 SLC25A43Q8WUT9 341 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-217ENST00000553287 CLIP3Q96DZ5 547 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 CEP95Q96GE4 821 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 NRDE2Q9H7Z3 1164 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 POGKQ9P215 609 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 SCOCQ9UIL1 159 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 PCDHGA2Q9Y5H1 932 aa6.4□□□□□ -1.38
ATXN3-217ENST00000553287 ZCCHC11Q5TAX3 1644 aaKnown RBP6.39□□□□□ -1.39
ATXN3-217ENST00000553287 B5MCH6 92 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 K7ESF4 209 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 OSMP13725 252 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 ECHS1P30084 290 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 APOBEC3AP31941 199 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-217ENST00000553287 MTNR1BP49286 362 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 MALLQ13021 153 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 FHL2Q14192 279 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 CSRP2Q16527 193 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 BMT2Q1RMZ1 405 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 MST1LQ2TV78 715 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 FAM47AQ5JRC9 791 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 OR7D4Q8NG98 312 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 NEU4Q8WWR8 484 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-217ENST00000553287 HAS1Q92839 578 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 SLC2A13Q96QE2 648 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 MENTQ9BUN1 341 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 ADI1Q9BV57 179 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 TRIM8Q9BZR9 551 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 KCNH6Q9H252 994 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 BCO1Q9HAY6 547 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 DMRT3Q9NQL9 472 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 PLB1Q6P1J6 1458 aa6.39□□□□□ -1.39
ATXN3-217ENST00000553287 ADH4P08319 380 aa6.38□□□□□ -1.39
ATXN3-217ENST00000553287 MCAMP43121 646 aa6.38□□□□□ -1.39
ATXN3-217ENST00000553287 PPP3CAQ08209 521 aa6.38□□□□□ -1.39
ATXN3-217ENST00000553287 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-217ENST00000553287 MBNL2Q5VZF2 373 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms