RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 USP41Q3LFD5 358 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 TPRG1Q6ZUI0 275 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 CDR2LQ86X02 465 aaPredicted RBP9.47□□□□□ -0.89
CDK4-213ENST00000552713 RNF149Q8NC42 400 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 HASPINQ8TF76 798 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 CCDC12Q8WUD4 166 aaPredicted RBP9.47□□□□□ -0.89
CDK4-213ENST00000552713 CLDN23Q96B33 292 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 RTKNQ9BST9 563 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 COLEC11Q9BWP8 271 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 OSBPL6Q9BZF3 934 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 NXF3Q9H4D5 531 aaKnown RBP9.47□□□□□ -0.89
CDK4-213ENST00000552713 PRMT8Q9NR22 394 aaPredicted RBP9.47□□□□□ -0.89
CDK4-213ENST00000552713 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 ADAM28Q9UKQ2 775 aa9.47□□□□□ -0.89
CDK4-213ENST00000552713 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.47□□□□□ -0.89
CDK4-213ENST00000552713 CYP3A7-CYP3A51PA0A087WV96 503 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 PRR5-ARHGAP8B1AHC4 643 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
CDK4-213ENST00000552713 SLC37A4O43826 429 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 C1RP00736 705 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 C8AP07357 584 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 TDGF1P13385 188 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 CYP3A7P24462 503 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 IGFBP6P24592 240 aaPredicted RBP9.46□□□□□ -0.9
CDK4-213ENST00000552713 ARHGAP8P85298 464 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 LMNB2Q03252 620 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 PRKCQQ04759 706 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 SPEM2Q0P670 501 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 MTAPQ13126 283 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 AMHR2Q16671 573 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 TSGA10IPQ3SY00 556 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 ZBTB41Q5SVQ8 909 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 Q6ZUG5 572 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 FERMT3Q86UX7 667 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 SKAP1Q86WV1 359 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 GPR161Q8N6U8 529 aaKnown RBP9.46□□□□□ -0.9
CDK4-213ENST00000552713 PSPC1Q8WXF1 523 aaKnown RBP9.46□□□□□ -0.9
CDK4-213ENST00000552713 ING5Q8WYH8 240 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 CEP170P1Q96L14 293 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 SLC26A6Q9BXS9 759 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 XPNPEP1Q9NQW7 623 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 HEBP1Q9NRV9 189 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDK4-213ENST00000552713 VAV3Q9UKW4 847 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 POLIQ9UNA4 740 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 ZFP37Q9Y6Q3 630 aaPredicted RBP9.46□□□□□ -0.9
CDK4-213ENST00000552713 NID2Q14112 1375 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 CFAP47Q6ZTR5 3102 aa9.46□□□□□ -0.9
CDK4-213ENST00000552713 M0R2N6 131 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 B4GALT5O43286 388 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 ERLIN2O94905 339 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 ARF4P18085 180 aaPredicted RBP9.45□□□□□ -0.9
CDK4-213ENST00000552713 SDHBP21912 280 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 QARSP47897 775 aaKnown RBP9.45□□□□□ -0.9
CDK4-213ENST00000552713 PTENP60484 403 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 EMC2Q15006 297 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 NPY5RQ15761 445 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 SLC5A9Q2M3M2 681 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 PPM1JQ5JR12 505 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 PPM1LQ5SGD2 360 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 RNF20Q5VTR2 975 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 MTSS1LQ765P7 747 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 NPAS3Q8IXF0 933 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 LNX1Q8TBB1 728 aaPredicted RBP9.45□□□□□ -0.9
CDK4-213ENST00000552713 BICD2Q8TD16 824 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 SLC7A3Q8WY07 619 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 BRF1Q92994 677 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 JPH2Q9BR39 696 aaPredicted RBP9.45□□□□□ -0.9
CDK4-213ENST00000552713 PHF20Q9BVI0 1012 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 CSRNP2Q9H175 543 aa9.45□□□□□ -0.9
CDK4-213ENST00000552713 NCOA5Q9HCD5 579 aaKnown RBP9.45□□□□□ -0.9
CDK4-213ENST00000552713 DNMT3BQ9UBC3 853 aaKnown RBP9.45□□□□□ -0.9
CDK4-213ENST00000552713 CCDC196A0A1B0GTZ2 297 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 CASTOR2A6NHX0 329 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 INO80B-WBP1J3KQ70 363 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 SLC30A4O14863 429 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 TBC1D4O60343 1298 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 GDF9O60383 454 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 TADA2AO75478 443 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 KIF4AO95239 1232 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 NPTXRO95502 500 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDK4-213ENST00000552713 RPS9P46781 194 aaKnown RBP9.44□□□□□ -0.9
CDK4-213ENST00000552713 NLRP5P59047 1200 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
CDK4-213ENST00000552713 MBTD1Q05BQ5 628 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 PPP2R5CQ13362 524 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 HSP90AA2PQ14568 343 aaPredicted RBP9.44□□□□□ -0.9
CDK4-213ENST00000552713 PSMD5Q16401 504 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 FAM171A1Q5VUB5 890 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 TANGO2Q6ICL3 276 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 NOTUMQ6P988 496 aa9.44□□□□□ -0.9
CDK4-213ENST00000552713 RSPO2Q6UXX9 243 aaPredicted RBP9.44□□□□□ -0.9
CDK4-213ENST00000552713 CEP57Q86XR8 500 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms