RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 MAP3K15Q6ZN16 1313 aa6.96□□□□□ -1.3
PRDM4-206ENST00000550659 UBN2Q6ZU65 1347 aa6.96□□□□□ -1.3
PRDM4-206ENST00000550659 USP42Q9H9J4 1324 aaKnown RBP6.96□□□□□ -1.3
PRDM4-206ENST00000550659 COL24A1Q17RW2 1714 aa6.96□□□□□ -1.3
PRDM4-206ENST00000550659 AFDNP55196 1824 aaKnown RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 PRSS38A1L453 326 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 GOLGA6L22H0YM25 854 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 IFRD1O00458 451 aaPredicted RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 SRGAP3O43295 1099 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 GPTP24298 496 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 HK2P52789 917 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 DDR1Q08345 913 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 KCNMA1Q12791 1236 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 ZNF267Q14586 743 aaPredicted RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 PAN2Q504Q3 1202 aaKnown RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 ZBTB41Q5SVQ8 909 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 BEND3Q5T5X7 828 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 TBC1D9BQ66K14 1250 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 CCDC62Q6P9F0 684 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 LILRA6Q6PI73 481 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 ATF7IPQ6VMQ6 1270 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 MILR1Q7Z6M3 343 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 C11orf96Q7Z7L8 435 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 WFDC3Q8IUB2 231 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 CILP2Q8IUL8 1156 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 SIRT2Q8IXJ6 389 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 TMEM57Q8N5G2 664 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 AUTS2Q8WXX7 1259 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 FERMT2Q96AC1 680 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 IL17RAQ96F46 866 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 PEX11GQ96HA9 241 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 FAM193BQ96PV7 902 aaPredicted RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 MYD88Q99836 296 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 GTPBP4Q9BZE4 634 aaKnown RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 STK32BQ9NY57 414 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 NARFQ9UHQ1 456 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 TUBD1Q9UJT1 453 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 NUDT5Q9UKK9 219 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 EDARQ9UNE0 448 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 NUMBLQ9Y6R0 609 aa6.95□□□□□ -1.3
PRDM4-206ENST00000550659 GOLGB1Q14789 3259 aaKnown RBP6.95□□□□□ -1.3
PRDM4-206ENST00000550659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.94□□□□□ -1.3
PRDM4-206ENST00000550659 CREB3O43889 395 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 PRPF6O94906 941 aaKnown RBP6.94□□□□□ -1.3
PRDM4-206ENST00000550659 EFEMP2O95967 443 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 PRNPP04156 253 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 AOAHP28039 575 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 NEK3P51956 506 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 USP14P54578 494 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 RASSF7Q02833 373 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 MUM1Q2TAK8 710 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 MBNL2Q5VZF2 373 aaKnown RBP6.94□□□□□ -1.3
PRDM4-206ENST00000550659 SRGAP1Q7Z6B7 1085 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 CATIPQ7Z7H3 387 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 NLRX1Q86UT6 975 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 ZNF34Q8IZ26 560 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 HIPK4Q8NE63 616 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 PLBD2Q8NHP8 589 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 DIS3LQ8TF46 1054 aaKnown RBP6.94□□□□□ -1.3
PRDM4-206ENST00000550659 DNAAF4Q8WXU2 420 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 TUBGCP5Q96RT8 1024 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 STRBPQ96SI9 672 aaKnown RBP6.94□□□□□ -1.3
PRDM4-206ENST00000550659 FOXB1Q99853 325 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 MYL10Q9BUA6 226 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 ISCA1Q9BUE6 129 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 TNFRSF12AQ9NP84 129 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 DNM3Q9UQ16 869 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
PRDM4-206ENST00000550659 TNRC6CQ9HCJ0 1690 aaKnown RBP6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ERVV-1B6SEH8 477 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 DYRK3O43781 588 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ZBTB7AO95365 584 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 PRLP01236 227 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 HPXP02790 462 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 HRGP04196 525 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 DBHP09172 617 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 FAHP16930 419 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 RHCEP18577 417 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 TM4SF1P30408 202 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 RFC4P35249 363 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ARL4AP40617 200 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 HTR3AP46098 478 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 RHDQ02161 417 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 KIF23Q02241 960 aaPredicted RBP6.93□□□□□ -1.3
PRDM4-206ENST00000550659 GRIN1Q05586 938 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 NFIXQ14938 502 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 SUSD4Q5VX71 490 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ZKSCAN2Q63HK3 967 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 KIAA1841Q6NSI8 718 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 KANSL1Q7Z3B3 1105 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 SPRED2Q7Z698 418 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 LILRA2Q8N149 483 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ARRDC4Q8NCT1 418 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 RSAD2Q8WXG1 361 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ARHGAP45Q92619 1136 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ERCC4Q92889 916 aaPredicted RBP6.93□□□□□ -1.3
PRDM4-206ENST00000550659 KAZALD1Q96I82 304 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 SLC2A13Q96QE2 648 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 MAP3K14Q99558 947 aa6.93□□□□□ -1.3
PRDM4-206ENST00000550659 ARPC5LQ9BPX5 153 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms