RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SIX2Q9NPC8 291 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 CHCHD3Q9NX63 227 aaKnown RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 DNM3Q9UQ16 869 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 GOLGA8RI6L899 631 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 WDR4P57081 412 aaKnown RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 THOC5Q13769 683 aaKnown RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 PRR16Q569H4 304 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 LRRC74BQ6ZQY2 392 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 SMC6Q96SB8 1091 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 NDNQ99608 321 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 KDM3AQ9Y4C1 1321 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 CDH16O75309 829 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 HSPA6P17066 643 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 YY1P25490 414 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 SKIV2L2P42285 1042 aaKnown RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 MCL1Q07820 350 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 COG2Q14746 738 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 HAS1Q92839 578 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 KLF6Q99612 283 aaPredicted RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 OCEL1Q9H607 264 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 DNAJC18Q9H819 358 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 PICK1Q9NRD5 415 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 CHST7Q9NS84 486 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 NINJ2Q9NZG7 142 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 GPR75-ASB3A0A0A6YYF3 556 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 MIF4GDA9UHW6 222 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 NMT1P30419 496 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 FOXB2Q5VYV0 432 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 CEP128Q6ZU80 1094 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 CFAP61Q8NHU2 1237 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 SLC7A6OSQ96CW6 309 aaPredicted RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 TRABDQ9H4I3 376 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 E7ENQ6 273 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 FAM13AO94988 1023 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 PIK3CAP42336 1068 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 WASHC2DQ5SRD0 308 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 RHOT2Q8IXI1 618 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 STK33Q9BYT3 514 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 C12orf65Q9H3J6 166 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 TXNDC9O14530 226 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 CHMP2AO43633 222 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 GAS8O95995 478 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 LMNAP02545 664 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 LDHBP07195 334 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 CHRNB2P17787 502 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 PTPN4P29074 926 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 TBC1D10BQ4KMP7 808 aaPredicted RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 ABTB1Q969K4 478 aaPredicted RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 ELMO3Q96BJ8 720 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 ZNF653Q96CK0 615 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 SNF8Q96H20 258 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 FAM161BQ96MY7 647 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 INTS2Q9H0H0 1204 aaKnown RBP12.91□□□□□ -0.34
VDR-208ENST00000550325 VCX3BQ9H321 246 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 VCX3AQ9NNX9 186 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 SAYSD1Q9NPB0 183 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
VDR-208ENST00000550325 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 ZBED4O75132 1171 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 GPC5P78333 572 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 MYL7Q01449 175 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CLUL1Q15846 466 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 ARSHQ5FYA8 562 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 OR52E8Q6IFG1 317 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 NUP85Q9BW27 656 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 FRMD4BQ9Y2L6 1034 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 EXOC3O60645 756 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 HAUS5O94927 633 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 PLS3P13797 630 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
VDR-208ENST00000550325 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
VDR-208ENST00000550325 KCNQ4P56696 695 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 JAM2P57087 298 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CBWD6Q4V339 395 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CBWD3Q5JTY5 395 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CBWD5Q5RIA9 395 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 SLC30A5Q8TAD4 765 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 PCIF1Q9H4Z3 704 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 PSTPIP2Q9H939 334 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 TJP3O95049 919 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 T-ENOLP0DO92 83 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms