RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PRRC2BQ5JSZ5 2229 aaKnown RBP21.17■□□□□ 0.98
DDX54-207ENST00000550016 CARNS1A5YM72 827 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 KLRC4O43908 158 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 LPXNO60711 386 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 GADD45BO75293 160 aaPredicted RBP21.17■□□□□ 0.98
DDX54-207ENST00000550016 POMCP01189 267 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 HARSP12081 509 aaKnown RBP21.17■□□□□ 0.98
DDX54-207ENST00000550016 SLFN12LQ6IEE8 588 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 SLC39A4Q6P5W5 647 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 KCNT2Q6UVM3 1135 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 CLEC17AQ6ZS10 378 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 THNSL1Q8IYQ7 743 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 KLHL23Q8NBE8 558 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 FAM193BQ96PV7 902 aaPredicted RBP21.17■□□□□ 0.98
DDX54-207ENST00000550016 RPS6KC1Q96S38 1066 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 HAPLN2Q9GZV7 340 aa21.17■□□□□ 0.98
DDX54-207ENST00000550016 ANK1P16157 1881 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 ANKRD63C9JTQ0 380 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 DDHD2O94830 711 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 PRPF6O94906 941 aaKnown RBP21.16■□□□□ 0.98
DDX54-207ENST00000550016 FOSL2P15408 326 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 POU3F3P20264 500 aaPredicted RBP21.16■□□□□ 0.98
DDX54-207ENST00000550016 IGFBP4P22692 258 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 ALDH7A1P49419 539 aaKnown RBP21.16■□□□□ 0.98
DDX54-207ENST00000550016 SCNN1GP51170 649 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 YARSP54577 528 aaKnown RBP21.16■□□□□ 0.98
DDX54-207ENST00000550016 BCAR1P56945 870 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 OSTNP61366 133 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 KCNA1Q09470 495 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 KYAT1Q16773 422 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 ZNF280BQ86YH2 543 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 SYCP3Q8IZU3 236 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 CEP120Q8N960 986 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 GSTCDQ8NEC7 633 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 ACAP3Q96P50 834 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 GBP3Q9H0R5 595 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 TMEM206Q9H813 350 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 EXOC1Q9NV70 894 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 PLAGL2Q9UPG8 496 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 STXBP5LQ9Y2K9 1186 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 STYXL1Q9Y6J8 313 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 MYO7AQ13402 2215 aa21.16■□□□□ 0.98
DDX54-207ENST00000550016 A0A0B4J269 797 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 EIF3DO15371 548 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDX54-207ENST00000550016 ZC3H11AO75152 810 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDX54-207ENST00000550016 RPN1P04843 607 aaKnown RBP21.15■□□□□ 0.98
DDX54-207ENST00000550016 PRR29P0C7W0 189 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 DPYDQ12882 1025 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 PSMD2Q13200 908 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 KMT5BQ4FZB7 885 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 EPM2AIP1Q7L775 607 aaPredicted RBP21.15■□□□□ 0.98
DDX54-207ENST00000550016 GLIS3Q8NEA6 775 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 ZNF507Q8TCN5 953 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 TIGD1Q96MW7 591 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 TOPORSQ9NS56 1045 aaPredicted RBP21.15■□□□□ 0.98
DDX54-207ENST00000550016 SPG21Q9NZD8 308 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 LMCD1Q9NZU5 365 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 DNAJB4Q9UDY4 337 aa21.15■□□□□ 0.98
DDX54-207ENST00000550016 OGTO15294 1046 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 GRM6O15303 877 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 NR1I2O75469 434 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 FGF18O76093 207 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 ITGB1P05556 798 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 GALTP07902 379 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 CLTAP09496 248 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 PPM1AP35813 382 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 UBE2HP62256 183 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 GRIK3Q13003 919 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 POSTNQ15063 836 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 SPPL3Q8TCT6 385 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 CCDC47Q96A33 483 aaKnown RBP21.14■□□□□ 0.97
DDX54-207ENST00000550016 TMEM175Q9BSA9 504 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 MSTO1Q9BUK6 570 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 LMAN2LQ9H0V9 348 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 IKZF4Q9H2S9 585 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 ALG13Q9NP73 1137 aaKnown RBP21.14■□□□□ 0.97
DDX54-207ENST00000550016 SLC39A2Q9NP94 309 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 MTCH2Q9Y6C9 303 aa21.14■□□□□ 0.97
DDX54-207ENST00000550016 UBE4BO95155 1302 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 TISP43B9A030 160 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 PTGESO14684 152 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 B4GALT3O60512 393 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 PRPF40AO75400 957 aaKnown RBP21.13■□□□□ 0.97
DDX54-207ENST00000550016 ALDH2P05091 517 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 THP07101 528 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 PBX3P40426 434 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 PLCB3Q01970 1234 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 DSC1Q08554 894 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 PTPROQ16827 1216 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 SEZ6Q53EL9 994 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 XKR4Q5GH76 650 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 ALKAL1Q6UXT8 129 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 COLGALT2Q8IYK4 626 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 SLC39A11Q8N1S5 342 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 POMGNT1Q8WZA1 660 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 MRPL38Q96DV4 380 aaKnown RBP21.13■□□□□ 0.97
DDX54-207ENST00000550016 CXCL16Q9H2A7 254 aa21.13■□□□□ 0.97
DDX54-207ENST00000550016 HOOK1Q9UJC3 728 aaKnown RBP21.13■□□□□ 0.97
DDX54-207ENST00000550016 NT5C1B-RDH14C9J2C7 533 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 FAM189A1O60320 539 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms