RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 RECQL4O94761 1208 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 KIF20AO95235 890 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 THP07101 528 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 MYBP10242 640 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 OSTNP61366 133 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 UBE2HP62256 183 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 BMS1Q14692 1282 aaKnown RBP16.34■□□□□ 0.21
GPN3-206ENST00000549963 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 GUCD1Q96NT3 240 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 TMEM175Q9BSA9 504 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 MSTO1Q9BUK6 570 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 STRA6Q9BX79 667 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 LMAN2LQ9H0V9 348 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 FAN1Q9Y2M0 1017 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 CITO14578 2027 aa16.34■□□□□ 0.21
GPN3-206ENST00000549963 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 RFXAPO00287 272 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 OGTO15294 1046 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
GPN3-206ENST00000549963 PPP1R37O75864 691 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
GPN3-206ENST00000549963 SMC2O95347 1197 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 LDHAP00338 332 aaKnown RBP16.33■□□□□ 0.2
GPN3-206ENST00000549963 RPN1P04843 607 aaKnown RBP16.33■□□□□ 0.2
GPN3-206ENST00000549963 CLTAP09496 248 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 CASP1P29466 404 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 SCNN1GP51170 649 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 BCAR1P56945 870 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 UBE3AQ05086 875 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 GRIK3Q13003 919 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
GPN3-206ENST00000549963 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 ENGASEQ8NFI3 743 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 ZNF507Q8TCN5 953 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 POMGNT1Q8WZA1 660 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 ZFP42Q96MM3 310 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 NRDE2Q9H7Z3 1164 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 STK39Q9UEW8 545 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 PLAGL2Q9UPG8 496 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 STXBP5LQ9Y2K9 1186 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.2
GPN3-206ENST00000549963 A0A0B4J269 797 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 FGF18O76093 207 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 UBE4BO95155 1302 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 POU3F3P20264 500 aaPredicted RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 SNRPFP62306 86 aaKnown RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 SNW1Q13573 536 aaKnown RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 TRIP11Q15643 1979 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 KMT5BQ4FZB7 885 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 CLEC17AQ6ZS10 378 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 SPRED2Q7Z698 418 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 GDPD5Q8WTR4 605 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 TMEM169Q96HH4 297 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 COLEC11Q9BWP8 271 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 PLEKHA5Q9HAU0 1116 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 SLC39A2Q9NP94 309 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 RMND1Q9NWS8 449 aa16.32■□□□□ 0.2
GPN3-206ENST00000549963 AGO2Q9UKV8 859 aaKnown RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
GPN3-206ENST00000549963 EPOPA6NHQ4 379 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 ANKRD63C9JTQ0 380 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 ABLIM1O14639 778 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 KIAA0391O15091 583 aaKnown RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 GADD45BO75293 160 aaPredicted RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 GALTP07902 379 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 LINC00271P0C7V0 271 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 GARTP22102 1010 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 OR1G1P47890 313 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 CASP5P51878 434 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 PLCB3Q01970 1234 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 DPYDQ12882 1025 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 HS2ST1Q7LGA3 356 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 CD302Q8IX05 232 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 ELOA2Q8IYF1 753 aaPredicted RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 PPP2R3CQ969Q6 453 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 TSPAN18Q96SJ8 248 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 ALG13Q9NP73 1137 aaKnown RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 MIOSQ9NXC5 875 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 CGNQ9P2M7 1197 aaKnown RBP16.31■□□□□ 0.2
GPN3-206ENST00000549963 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 STYXL1Q9Y6J8 313 aa16.31■□□□□ 0.2
GPN3-206ENST00000549963 KLRC4O43908 158 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 LPXNO60711 386 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 DDHD2O94830 711 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 ITGB1P05556 798 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 AFF1P51825 1210 aaKnown RBP16.3■□□□□ 0.2
GPN3-206ENST00000549963 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
GPN3-206ENST00000549963 EHHADHQ08426 723 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 KCNA1Q09470 495 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 TUSC3Q13454 348 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 KCNB1Q14721 858 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 EPM2AIP1Q7L775 607 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms