RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SERHL2Q9H4I8 314 aa5.73□□□□□ -1.49
CCDC38-206ENST00000548771 AKIP1Q9NQ31 210 aa5.73□□□□□ -1.49
CCDC38-206ENST00000548771 APOBEC2Q9Y235 224 aaKnown RBP5.73□□□□□ -1.49
CCDC38-206ENST00000548771 PJA2O43164 708 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 PHF2O75151 1096 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 EYA4O95677 639 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 RNASE9P60153 205 aaKnown RBP5.72□□□□□ -1.49
CCDC38-206ENST00000548771 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.72□□□□□ -1.49
CCDC38-206ENST00000548771 PDCD4Q53EL6 469 aaKnown RBP5.72□□□□□ -1.49
CCDC38-206ENST00000548771 Q6YL49 198 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 ZNF572Q7Z3I7 529 aaPredicted RBP5.72□□□□□ -1.49
CCDC38-206ENST00000548771 AFAP1L2Q8N4X5 818 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 OR10H5Q8NGA6 315 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 SLC35B2Q8TB61 432 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 ZNF480Q8WV37 535 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 ADAM2Q99965 735 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 SYNPO2LQ9H987 977 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 SPON1Q9HCB6 807 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 VTA1Q9NP79 307 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 DPP7Q9UHL4 492 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 EDARQ9UNE0 448 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 PNPLA7Q6ZV29 1317 aa5.72□□□□□ -1.49
CCDC38-206ENST00000548771 ADCY6O43306 1168 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 B3GALT2O43825 422 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 RBP3P10745 1247 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 MGAT1P26572 445 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 STRN3Q13033 797 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 PDZD4Q76G19 769 aaPredicted RBP5.71□□□□□ -1.5
CCDC38-206ENST00000548771 PLXDC1Q8IUK5 500 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 TRMT2AQ8IZ69 625 aaKnown RBP5.71□□□□□ -1.5
CCDC38-206ENST00000548771 UBR7Q8N806 425 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 BEND2Q8NDZ0 799 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 GPR156Q8NFN8 814 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.5
CCDC38-206ENST00000548771 HOXB13Q92826 284 aaPredicted RBP5.71□□□□□ -1.5
CCDC38-206ENST00000548771 FAM193BQ96PV7 902 aaPredicted RBP5.71□□□□□ -1.5
CCDC38-206ENST00000548771 CAAP1Q9H8G2 361 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
CCDC38-206ENST00000548771 SETD1BQ9UPS6 1966 aaKnown RBP5.7□□□□□ -1.5
CCDC38-206ENST00000548771 DRGXA6NNA5 263 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 CXorf49A8MYA2 514 aaPredicted RBP5.7□□□□□ -1.5
CCDC38-206ENST00000548771 HSD3B2P26439 372 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 CANXP27824 592 aaKnown RBP5.7□□□□□ -1.5
CCDC38-206ENST00000548771 MASP1P48740 699 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 PPP3CAQ08209 521 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 ADRM1Q16186 407 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 MUM1Q2TAK8 710 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 ANO4Q32M45 955 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 EFCAB12Q6NXP0 572 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 NPM2Q86SE8 214 aaKnown RBP5.7□□□□□ -1.5
CCDC38-206ENST00000548771 OR7D4Q8NG98 312 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 LINC00476Q8WZB0 136 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 TFAP2CQ92754 450 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 WDR11Q9BZH6 1224 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 BCO1Q9HAY6 547 aa5.7□□□□□ -1.5
CCDC38-206ENST00000548771 ALG13Q9NP73 1137 aaKnown RBP5.7□□□□□ -1.5
CCDC38-206ENST00000548771 BRINP1O60477 761 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 NDUFA10O95299 355 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 ALOX15P16050 662 aaPredicted RBP5.69□□□□□ -1.5
CCDC38-206ENST00000548771 BMP5P22003 454 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 FBLP22087 321 aaKnown RBP5.69□□□□□ -1.5
CCDC38-206ENST00000548771 CDK17Q00537 523 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 HECTD2Q5U5R9 776 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 AGAP9Q5VTM2 703 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 GIMAP6Q6P9H5 292 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 HDGFL2Q7Z4V5 671 aaPredicted RBP5.69□□□□□ -1.5
CCDC38-206ENST00000548771 PRIMA1Q86XR5 153 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 REPS2Q8NFH8 660 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 ZFP28Q8NHY6 868 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 AUTS2Q8WXX7 1259 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 ANKFY1Q9P2R3 1169 aa5.69□□□□□ -1.5
CCDC38-206ENST00000548771 EPN1Q9Y6I3 576 aaPredicted RBP5.69□□□□□ -1.5
CCDC38-206ENST00000548771 PIPSLA2A3N6 862 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 GUCY1A2P33402 732 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 GPR3P46089 330 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 CLRN1P58418 232 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 OLFML1Q6UWY5 402 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 RNF169Q8NCN4 708 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 FATE1Q969F0 183 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 FUBP1Q96AE4 644 aaKnown RBP5.68□□□□□ -1.5
CCDC38-206ENST00000548771 COQ10AQ96MF6 247 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 POGKQ9P215 609 aa5.68□□□□□ -1.5
CCDC38-206ENST00000548771 GOLGA8AA7E2F4 631 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 AKR1B10O60218 316 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 CFIP05156 583 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 ELANEP08246 267 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 EGR2P11161 476 aaPredicted RBP5.67□□□□□ -1.5
CCDC38-206ENST00000548771 TYRP1P17643 537 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 ADSLP30566 484 aaPredicted RBP5.67□□□□□ -1.5
CCDC38-206ENST00000548771 SREBF1P36956 1147 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 SCAPQ12770 1279 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 SP140Q13342 867 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 CPEB3Q8NE35 698 aaKnown RBP5.67□□□□□ -1.5
CCDC38-206ENST00000548771 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
CCDC38-206ENST00000548771 GREM2Q9H772 168 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 IFT122Q9HBG6 1241 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 KAT6AQ92794 2004 aa5.67□□□□□ -1.5
CCDC38-206ENST00000548771 VIL1P09327 827 aaKnown RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 SNRPA1P09661 255 aaKnown RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 SOX5P35711 763 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms