RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 KIZQ2M2Z5 673 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 DCAF4L1Q3SXM0 396 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 C1orf220Q5T0J3 134 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 RUFY4Q6ZNE9 571 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 ZBTB33Q86T24 672 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 CCAR2Q8N163 923 aaKnown RBP13.41□□□□□ -0.26
RAB5B-204ENST00000548068 FBXL13Q8NEE6 735 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 PLEKHO2Q8TD55 490 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
RAB5B-204ENST00000548068 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 HAPLN2Q9GZV7 340 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 TMEM117Q9H0C3 514 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 PTPRHQ9HD43 1115 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 APEX2Q9UBZ4 518 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 COQ4Q9Y3A0 265 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
RAB5B-204ENST00000548068 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
RAB5B-204ENST00000548068 RALGAPA2Q2PPJ7 1873 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 SOWAHDA6NJG2 315 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 B4GALT5O43286 388 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 TSPAN1O60635 241 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 GPR32O75388 356 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CLTAP09496 248 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CCDC175P0C221 793 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CCDC172P0C7W6 258 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 HSPA6P17066 643 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 TNNI1P19237 187 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CLCN1P35523 988 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 RAPGEF1Q13905 1077 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 ARRDC4Q8NCT1 418 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CDT1Q9H211 546 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 SIX2Q9NPC8 291 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 CPSF3Q9UKF6 684 aaKnown RBP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 PTCH2Q9Y6C5 1203 aa13.4□□□□□ -0.26
RAB5B-204ENST00000548068 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
RAB5B-204ENST00000548068 SSU72P8A0A1W2PR75 194 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 FAM189A1O60320 539 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 TUBB4AP04350 444 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 SERPING1P05155 500 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 ACTN1P12814 892 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 FERP16591 822 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 ARF4P18085 180 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 ANXA13P27216 316 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 STAT1P42224 750 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 MRPS6P82932 125 aaKnown RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 ASIC2Q16515 512 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 EEF1DP3Q658K8 133 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 DPY19L2P1Q6NXN4 242 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 NOTUMQ6P988 496 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 WDR59Q6PJI9 974 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 TXLNBQ8N3L3 684 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 CCDC42Q96M95 316 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 NT5C1BQ96P26 610 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 SEZ6LQ9BYH1 1024 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 RPF1Q9H9Y2 349 aaKnown RBP13.39□□□□□ -0.27
RAB5B-204ENST00000548068 PDE11AQ9HCR9 933 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 AIPL1Q9NZN9 384 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 FHOD1Q9Y613 1164 aa13.39□□□□□ -0.27
RAB5B-204ENST00000548068 ANK1P16157 1881 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 A0A1B0GUA9 196 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 KBTBD13C9JR72 458 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-204ENST00000548068 NDUFA10O95299 355 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 IQCF3P0C7M6 154 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 ACLYP53396 1101 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 JAM2P57087 298 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 KRT83P78385 493 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 ZNF200P98182 395 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-204ENST00000548068 BIRC3Q13489 604 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 HIC1Q14526 733 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 SNX17Q15036 470 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 ZACNQ401N2 412 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
RAB5B-204ENST00000548068 WDR44Q5JSH3 913 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 SMYD5Q6GMV2 418 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
RAB5B-204ENST00000548068 SLC27A1Q6PCB7 646 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms