RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 TMEM189-UBE2V1I3L0A0 370 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 K7ENM7 598 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 NRP1O14786 923 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 POLR2DO15514 142 aaKnown RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 NCK2O43639 380 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 LILRB3O75022 631 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 ZC3H11AO75152 810 aaKnown RBP eCLIP11.98□□□□□ -0.49
GCN1-202ENST00000547263 POMCP01189 267 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 CTSAP10619 480 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 KCNE1P15382 129 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 IBSPP21815 317 aaPredicted RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 NMT1P30419 496 aaKnown RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 LTBRP36941 435 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 ALDH7A1P49419 539 aaKnown RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 POU5F1Q01860 360 aaKnown RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 HYAL1Q12794 435 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 STRN3Q13033 797 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 ALCAMQ13740 583 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
GCN1-202ENST00000547263 ZNF568Q3ZCX4 644 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 DYMQ7RTS9 669 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 APBB1IPQ7Z5R6 666 aaPredicted RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 ADGRD2Q7Z7M1 963 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.98□□□□□ -0.49
GCN1-202ENST00000547263 GPR65Q8IYL9 337 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 DHX58Q96C10 678 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 PABPC5Q96DU9 382 aaKnown RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 SNX27Q96L92 541 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 FGFBP2Q9BYJ0 223 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 PANK2Q9BZ23 570 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 LRRC27Q9C0I9 530 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 ZBP1Q9H171 429 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
GCN1-202ENST00000547263 FAM13BQ9NYF5 915 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 CNTN3Q9P232 1028 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 THEGQ9P2T0 379 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 VWA8A3KMH1 1905 aa11.98□□□□□ -0.49
GCN1-202ENST00000547263 TTC26A0AVF1 554 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 NT5C1B-RDH14C9J2C7 533 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 ALDH2P05091 517 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 KRT18P05783 430 aaKnown RBP11.97□□□□□ -0.49
GCN1-202ENST00000547263 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 PFKFB1P16118 471 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 CASP5P51878 434 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 KRT17Q04695 432 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 COASYQ13057 564 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 TUSC3Q13454 348 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 CCDC85BQ15834 202 aaPredicted RBP11.97□□□□□ -0.49
GCN1-202ENST00000547263 ZBTB6Q15916 424 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 SLC10A6Q3KNW5 377 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 ZC2HC1CQ53FD0 456 aaPredicted RBP11.97□□□□□ -0.49
GCN1-202ENST00000547263 SPOUT1Q5T280 376 aaKnown RBP11.97□□□□□ -0.49
GCN1-202ENST00000547263 TMEM184AQ6ZMB5 413 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 UNC13DQ70J99 1090 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 EPM2AIP1Q7L775 607 aaPredicted RBP11.97□□□□□ -0.49
GCN1-202ENST00000547263 CDCA3Q99618 268 aaPredicted RBP11.97□□□□□ -0.49
GCN1-202ENST00000547263 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 KLK14Q9P0G3 267 aa11.97□□□□□ -0.49
GCN1-202ENST00000547263 SMIM28A0A1B0GU29 152 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 PVALEFA0A1B0GWK0 134 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 FSD2A1L4K1 749 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 C2orf71A6NGG8 1288 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 CLDN3O15551 220 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 KLRC4O43908 158 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 PAPLNO95428 1278 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 GLP2RO95838 553 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 MYL1P05976 194 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 THP07101 528 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 LIG1P18858 919 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 ADSSP30520 456 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 HOXD13P35453 343 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 AMPD3Q01432 767 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 KCNA1Q09470 495 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 ADAM15Q13444 863 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 KYAT1Q16773 422 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 DUSP6Q16828 381 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 L1TD1Q5T7N2 865 aaKnown RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 CD300LGQ6UXG3 332 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 CCDC65Q8IXS2 484 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 EFHBQ8N7U6 833 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 MRPL43Q8N983 215 aaKnown RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 STAMQ92783 540 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 HLA-CQ95604 372 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 TMEM169Q96HH4 297 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 MSLNLQ96KJ4 702 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 ZMAT2Q96NC0 199 aaKnown RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 TSPAN18Q96SJ8 248 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 APOL6Q9BWW8 343 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 UBE2ZQ9H832 354 aaPredicted RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 TOPORSQ9NS56 1045 aaPredicted RBP11.96□□□□□ -0.49
GCN1-202ENST00000547263 PANK4Q9NVE7 773 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 PARP2Q9UGN5 583 aa11.96□□□□□ -0.49
GCN1-202ENST00000547263 PUF60Q9UHX1 559 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms