RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 CHST12Q9NRB3 414 aa12.23□□□□□ -0.45
TROAP-204ENST00000546776 SAMSN1Q9NSI8 373 aaKnown RBP12.23□□□□□ -0.45
TROAP-204ENST00000546776 CXXC1Q9P0U4 656 aaPredicted RBP12.23□□□□□ -0.45
TROAP-204ENST00000546776 ST3GAL5Q9UNP4 418 aa12.23□□□□□ -0.45
TROAP-204ENST00000546776 PIN4Q9Y237 131 aaKnown RBP12.23□□□□□ -0.45
TROAP-204ENST00000546776 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
TROAP-204ENST00000546776 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 ZNF233A6NK53 670 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 OGTO15294 1046 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 EXTL3O43909 919 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 SERPINC1P01008 464 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 AMHP03971 560 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 GHRP10912 638 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 HARSP12081 509 aaKnown RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 PRKCSHP14314 528 aaPredicted RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 FGFR4P22455 802 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 DNAJB2P25686 324 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 ADSSP30520 456 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 FILIP1LQ4L180 1135 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 TCP11X2Q5H9J9 407 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 TWF2Q6IBS0 349 aaKnown RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 INTS8Q75QN2 995 aaKnown RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 FRMD5Q7Z6J6 570 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 HACE1Q8IYU2 909 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 ANP32BQ92688 251 aaKnown RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 CPB2Q96IY4 423 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 IKZF4Q9H2S9 585 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 PTPRHQ9HD43 1115 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 ERVK-5Q9HDB9 667 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
TROAP-204ENST00000546776 PADI3Q9ULW8 664 aa12.22□□□□□ -0.45
TROAP-204ENST00000546776 TISP43B9A030 160 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 AKAP3O75969 853 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 EDN1P05305 212 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 SKIP12755 728 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 ZNF18P17022 549 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.45
TROAP-204ENST00000546776 POU5F1Q01860 360 aaKnown RBP12.21□□□□□ -0.45
TROAP-204ENST00000546776 ENPEPQ07075 957 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 LPIN1Q14693 890 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 GPNMBQ14956 572 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 SURF1Q15526 300 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 SNRNP35Q16560 246 aaKnown RBP12.21□□□□□ -0.45
TROAP-204ENST00000546776 HSP90AA4PQ58FG1 418 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 VWCEQ96DN2 955 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 SAAL1Q96ER3 474 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
TROAP-204ENST00000546776 FBXL18Q96ME1 805 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 FAM213AQ9BRX8 229 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
TROAP-204ENST00000546776 IFIH1Q9BYX4 1025 aaKnown RBP12.21□□□□□ -0.45
TROAP-204ENST00000546776 CDT1Q9H211 546 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 SLC28A3Q9HAS3 691 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 USP20Q9Y2K6 914 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 PCDHA11Q9Y5I1 949 aa12.21□□□□□ -0.45
TROAP-204ENST00000546776 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 CBFA2T2O43439 604 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 STX10O60499 249 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 NPTXRO95502 500 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 HOXA11P31270 313 aaPredicted RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 CD52P31358 61 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 RAB27AP51159 221 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 WDR5P61964 334 aaKnown RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 MBTPS1Q14703 1052 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 MAN2A1Q16706 1144 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 EEF1DP3Q658K8 133 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 HERC6Q8IVU3 1022 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 RDH13Q8NBN7 331 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 PBX4Q9BYU1 374 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 AGO3Q9H9G7 860 aaKnown RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 RPF1Q9H9Y2 349 aaKnown RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
TROAP-204ENST00000546776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
TROAP-204ENST00000546776 CITO14578 2027 aa12.2□□□□□ -0.46
TROAP-204ENST00000546776 GOLGA8IPA6NC78 632 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 GOLGA8JA6NMD2 632 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 GRXCR1A8MXD5 290 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
TROAP-204ENST00000546776 ABLIM1O14639 778 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 TLL1O43897 1013 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 IL18RAPO95256 599 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 CLTAP09496 248 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 ATP1A3P13637 1013 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 GRM5P41594 1212 aa12.19□□□□□ -0.46
TROAP-204ENST00000546776 CASP4P49662 377 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms