RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ADAM15Q13444 863 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 E2F4Q16254 413 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 DUSP6Q16828 381 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
YBX3-217ENST00000546164 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 SHC4Q6S5L8 630 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
YBX3-217ENST00000546164 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 MRPL43Q8N983 215 aaKnown RBP13.02□□□□□ -0.33
YBX3-217ENST00000546164 DDX12PQ92771 950 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 DNAJC19Q96DA6 116 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 VN1R3Q9BXE9 311 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 CUEDC2Q9H467 287 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 TLE6Q9H808 572 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 MARCH5Q9NX47 278 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 KLK14Q9P0G3 267 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 FAN1Q9Y2M0 1017 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 MYMKA6NI61 221 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 NR1I2O75469 434 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 CSPG5O95196 566 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 CTSAP10619 480 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 GAP43P17677 238 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
YBX3-217ENST00000546164 NRIP1P48552 1158 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 GTF2BQ00403 316 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 MCL1Q07820 350 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 TUSC3Q13454 348 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 SMC1AQ14683 1233 aaKnown RBP13.01□□□□□ -0.33
YBX3-217ENST00000546164 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
YBX3-217ENST00000546164 NAB2Q15742 525 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
YBX3-217ENST00000546164 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 PLPP4Q5VZY2 271 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 MAP4K3Q8IVH8 894 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 FAM178BQ8IXR5 827 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
YBX3-217ENST00000546164 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 CCDC94Q9BW85 323 aaPredicted RBP13.01□□□□□ -0.33
YBX3-217ENST00000546164 COL25A1Q9BXS0 654 aaPredicted RBP13.01□□□□□ -0.33
YBX3-217ENST00000546164 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 CLDND1Q9NY35 253 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 PCDHA7Q9UN72 937 aa13.01□□□□□ -0.33
YBX3-217ENST00000546164 C2orf71A6NGG8 1288 aa13□□□□□ -0.33
YBX3-217ENST00000546164 HIDE1A8MVS5 230 aa13□□□□□ -0.33
YBX3-217ENST00000546164 K7ENM7 598 aa13□□□□□ -0.33
YBX3-217ENST00000546164 TBX10O75333 385 aa13□□□□□ -0.33
YBX3-217ENST00000546164 PPP1R37O75864 691 aa13□□□□□ -0.33
YBX3-217ENST00000546164 THP07101 528 aa13□□□□□ -0.33
YBX3-217ENST00000546164 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
YBX3-217ENST00000546164 OR1G1P47890 313 aa13□□□□□ -0.33
YBX3-217ENST00000546164 ME1P48163 572 aa13□□□□□ -0.33
YBX3-217ENST00000546164 KCNQ1P51787 676 aa13□□□□□ -0.33
YBX3-217ENST00000546164 KCNC3Q14003 757 aa13□□□□□ -0.33
YBX3-217ENST00000546164 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
YBX3-217ENST00000546164 RESP18Q5W5W9 173 aa13□□□□□ -0.33
YBX3-217ENST00000546164 ALKAL1Q6UXT8 129 aa13□□□□□ -0.33
YBX3-217ENST00000546164 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
YBX3-217ENST00000546164 DYMQ7RTS9 669 aa13□□□□□ -0.33
YBX3-217ENST00000546164 GPR65Q8IYL9 337 aa13□□□□□ -0.33
YBX3-217ENST00000546164 PDILTQ8N807 584 aa13□□□□□ -0.33
YBX3-217ENST00000546164 CEP120Q8N960 986 aa13□□□□□ -0.33
YBX3-217ENST00000546164 IQUBQ8NA54 791 aa13□□□□□ -0.33
YBX3-217ENST00000546164 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
YBX3-217ENST00000546164 MSLNLQ96KJ4 702 aa13□□□□□ -0.33
YBX3-217ENST00000546164 TCHPQ9BT92 498 aa13□□□□□ -0.33
YBX3-217ENST00000546164 COLEC11Q9BWP8 271 aa13□□□□□ -0.33
YBX3-217ENST00000546164 STRA6Q9BX79 667 aa13□□□□□ -0.33
YBX3-217ENST00000546164 PANK2Q9BZ23 570 aa13□□□□□ -0.33
YBX3-217ENST00000546164 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
YBX3-217ENST00000546164 OLFML3Q9NRN5 406 aa13□□□□□ -0.33
YBX3-217ENST00000546164 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
YBX3-217ENST00000546164 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
YBX3-217ENST00000546164 GDAQ9Y2T3 454 aa13□□□□□ -0.33
YBX3-217ENST00000546164 PRG3Q9Y2Y8 225 aaPredicted RBP13□□□□□ -0.33
YBX3-217ENST00000546164 ATP6V1DQ9Y5K8 247 aa13□□□□□ -0.33
YBX3-217ENST00000546164 MYH11P35749 1972 aa13□□□□□ -0.33
YBX3-217ENST00000546164 H3BQ06 376 aaPredicted RBP12.99□□□□□ -0.33
YBX3-217ENST00000546164 HNRNPDLO14979 420 aaKnown RBP12.99□□□□□ -0.33
YBX3-217ENST00000546164 PER2O15055 1255 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 LINC01565O15544 149 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 CLDN3O15551 220 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 LILRB3O75022 631 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 GLP2RO95838 553 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 SOD2P04179 222 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 KCNE1P15382 129 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
YBX3-217ENST00000546164 KRT85P78386 507 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 DLX2Q07687 328 aaPredicted RBP12.99□□□□□ -0.33
YBX3-217ENST00000546164 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
YBX3-217ENST00000546164 RBM23Q86U06 439 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms