RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GPT2Q8TD30 523 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 ZFP42Q96MM3 310 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 GAD1Q99259 594 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 CCDC94Q9BW85 323 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-211ENST00000545998 MRPL9Q9BYD2 267 aaKnown RBP22.38■■□□□ 1.17
HMGA2-211ENST00000545998 ZNF576Q9H609 170 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 CWH43Q9H720 699 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 RMND1Q9NWS8 449 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 HCSTQ9UBK5 93 aa22.38■■□□□ 1.17
HMGA2-211ENST00000545998 OSTNP61366 133 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 NELFCDQ8IXH7 590 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 GSTCDQ8NEC7 633 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 URGCPQ8TCY9 931 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 TGS1Q96RS0 853 aaKnown RBP22.37■■□□□ 1.17
HMGA2-211ENST00000545998 MSTO1Q9BUK6 570 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 GBP3Q9H0R5 595 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 TBC1D13Q9NVG8 400 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 KLK14Q9P0G3 267 aa22.37■■□□□ 1.17
HMGA2-211ENST00000545998 OGTO15294 1046 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 ERVK-21P61565 698 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 SEZ6Q53EL9 994 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 ZNF697Q5TEC3 545 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 POMGNT1Q8WZA1 660 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 C17orf80Q9BSJ5 609 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 MIOSQ9NXC5 875 aa22.36■■□□□ 1.17
HMGA2-211ENST00000545998 TGFB1I1O43294 461 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 GARTP22102 1010 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 MCM4P33991 863 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 SCNN1GP51170 649 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 CAMK4Q16566 473 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 KYAT1Q16773 422 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 KNOP1Q1ED39 458 aaKnown RBP22.35■■□□□ 1.17
HMGA2-211ENST00000545998 ACAP3Q96P50 834 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 CXCL16Q9H2A7 254 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 SEMA6BQ9H3T3 888 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 CLSTN2Q9H4D0 955 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 KANSL3Q9P2N6 904 aa22.35■■□□□ 1.17
HMGA2-211ENST00000545998 AGO2Q9UKV8 859 aaKnown RBP22.35■■□□□ 1.17
HMGA2-211ENST00000545998 PDCD11Q14690 1871 aaKnown RBP22.35■■□□□ 1.17
HMGA2-211ENST00000545998 MEFVO15553 781 aaPredicted RBP22.34■■□□□ 1.17
HMGA2-211ENST00000545998 POMCP01189 267 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 CLTAP09496 248 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 TNFSF9P41273 254 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 YARSP54577 528 aaKnown RBP22.34■■□□□ 1.17
HMGA2-211ENST00000545998 ZBTB41Q5SVQ8 909 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 ALKAL1Q6UXT8 129 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 SAMD11Q96NU1 681 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 CBWD1Q9BRT8 395 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 TOPORSQ9NS56 1045 aaPredicted RBP22.34■■□□□ 1.17
HMGA2-211ENST00000545998 RWDD3Q9Y3V2 267 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 ANK1P16157 1881 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 EYSQ5T1H1 3165 aa22.34■■□□□ 1.17
HMGA2-211ENST00000545998 PTGESO14684 152 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 SNRPFP62306 86 aaKnown RBP22.33■■□□□ 1.17
HMGA2-211ENST00000545998 EPC2Q52LR7 807 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 XKR4Q5GH76 650 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 ZNF658Q5TYW1 1059 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-211ENST00000545998 ZNF280BQ86YH2 543 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 SNX27Q96L92 541 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 RPS6KC1Q96S38 1066 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 KCTD10Q9H3F6 313 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 CERS4Q9HA82 394 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 AGPAT3Q9NRZ7 376 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 MAN1B1Q9UKM7 699 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 MTUS1Q9ULD2 1270 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 PLAGL2Q9UPG8 496 aa22.33■■□□□ 1.17
HMGA2-211ENST00000545998 B4GALT3O60512 393 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 BMPR1AP36894 532 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 RNASELQ05823 741 aaKnown RBP22.33■■□□□ 1.16
HMGA2-211ENST00000545998 SLC10A6Q3KNW5 377 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 SPOUT1Q5T280 376 aaKnown RBP22.33■■□□□ 1.16
HMGA2-211ENST00000545998 ARMCX5Q6P1M9 558 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 Q7L0L9 218 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 SMYD4Q8IYR2 804 aaPredicted RBP22.33■■□□□ 1.16
HMGA2-211ENST00000545998 GUF1Q8N442 669 aaKnown RBP22.33■■□□□ 1.16
HMGA2-211ENST00000545998 NRDE2Q9H7Z3 1164 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 KIAA1468Q9P260 1216 aa22.33■■□□□ 1.16
HMGA2-211ENST00000545998 CPSF3Q9UKF6 684 aaKnown RBP22.33■■□□□ 1.16
HMGA2-211ENST00000545998 REV3LO60673 3130 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 C5orf67F2Z3F1 127 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 DDHD2O94830 711 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 KIF20AO95235 890 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 CXCL8P10145 99 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 LAG3P18627 525 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 CTNNB1P35222 781 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 ACOT2P49753 483 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 GRIK3Q13003 919 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 COBLL1Q53SF7 1204 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 CRELD2Q6UXH1 353 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-211ENST00000545998 HS2ST1Q7LGA3 356 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 COLGALT1Q8NBJ5 622 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 ZSWIM2Q8NEG5 633 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 ARNTL2Q8WYA1 636 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 GTPBP4Q9BZE4 634 aaKnown RBP22.32■■□□□ 1.16
HMGA2-211ENST00000545998 PCIF1Q9H4Z3 704 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 CNTN3Q9P232 1028 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 CGNQ9P2M7 1197 aaKnown RBP22.32■■□□□ 1.16
HMGA2-211ENST00000545998 MAPK8IP1Q9UQF2 711 aa22.32■■□□□ 1.16
HMGA2-211ENST00000545998 EPOPA6NHQ4 379 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 DSC1Q08554 894 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms