RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 KIRREL3Q8IZU9 778 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 ACAP3Q96P50 834 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 MMP19Q99542 508 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 FSD1LQ9BXM9 530 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
COL4A6-209ENST00000545689 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 RPA1P27694 616 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 CDR2Q01850 454 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 MOXD1Q6UVY6 613 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 RASSF3Q86WH2 238 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 SENP7Q9BQF6 1050 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 HEY1Q9Y5J3 304 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 EIF3HO15372 352 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL4A6-209ENST00000545689 CYP26A1O43174 497 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 AP2B1P63010 937 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
COL4A6-209ENST00000545689 HIF1AQ16665 826 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 FBXL16Q8N461 479 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 TTC8Q8TAM2 541 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
COL4A6-209ENST00000545689 BFARQ9NZS9 450 aa13.27□□□□□ -0.29
COL4A6-209ENST00000545689 NPHP3-ACAD11A0A0J9YXS1 232 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PPP1R12AO14974 1030 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 MYL3P08590 195 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 CDK17Q00537 523 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 CENPCQ03188 943 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PTPAQ15257 358 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 RIBC1Q8N443 379 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 RPAP3Q9H6T3 665 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 ARL2BPQ9Y2Y0 163 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 MAFGO15525 162 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PHEXP78562 749 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 OCRLQ01968 901 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PIGHQ14442 188 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 KIAA1841Q6NSI8 718 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 RYBPQ8N488 228 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 UBN1Q9NPG3 1134 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 AFF2P51816 1311 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 GPR75-ASB3A0A0A6YYF3 556 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 FRMD3A2A2Y4 597 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 CFAP69A5D8W1 941 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 NVLO15381 856 aaKnown RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PSMD3O43242 534 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PEX19P40855 299 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 ARSEP51690 589 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 VPS72Q15906 364 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 DCLK2Q8N568 766 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 CCDC138Q96M89 665 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 KIFC3Q9BVG8 833 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 C19orf81C9J6K1 198 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 NDUFB10O96000 172 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PDE1CQ14123 709 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 MAPRE2Q15555 327 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-209ENST00000545689 C1orf54Q8WWF1 131 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 DNAJC7Q99615 494 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 WWP1Q9H0M0 922 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 EPC1Q9H2F5 836 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 CFLARO15519 480 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 SPAG6O75602 509 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 SPATA21Q7Z572 469 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 SGSM3Q96HU1 749 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 GCNAQ96QF7 691 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 PPP1R16BQ96T49 567 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 CYTH2Q99418 400 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
COL4A6-209ENST00000545689 MEFVO15553 781 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 SERPINB4P48594 390 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 NUDCD3Q8IVD9 361 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 IL25Q9H293 177 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 HPSEQ9Y251 543 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 FIS1Q9Y3D6 152 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 YWHAHQ04917 246 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 SPP2Q13103 211 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 FIGNQ5HY92 759 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 SPATA33Q96N06 139 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 L2HGDHQ9H9P8 463 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 TTC7AQ9ULT0 858 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 SPATA31A1Q5TZJ5 1347 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 CDH16O75309 829 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 PRKCBP05771 671 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 Q3C1V9 767 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 C4orf22Q6V702 233 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 TEX2Q8IWB9 1127 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 TNIP3Q96KP6 325 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 RGL1Q9NZL6 768 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 MAD2L2Q9UI95 211 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 GRAMD1BQ3KR37 738 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 MYLK4Q86YV6 388 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 TMEM8AQ9HCN3 771 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-209ENST00000545689 SALL3Q9BXA9 1300 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 GOLGA8MH3BSY2 632 aa13.25□□□□□ -0.29
COL4A6-209ENST00000545689 ZNF185O15231 689 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms