RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TOR2AQ5JU69 321 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 KCNK18Q7Z418 384 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 TRMT2AQ8IZ69 625 aaKnown RBP6.59□□□□□ -1.35
SNHG1-224ENST00000545688 GPR156Q8NFN8 814 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 FBXO18Q8NFZ0 1043 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 SLC35B2Q8TB61 432 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 IFT122Q9HBG6 1241 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 AKIP1Q9NQ31 210 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 C14orf119Q9NWQ9 140 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 POGKQ9P215 609 aa6.59□□□□□ -1.35
SNHG1-224ENST00000545688 GRID2IPA4D2P6 1211 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 WNT10BO00744 389 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 PROZP22891 400 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 PTPN7P35236 360 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 SRSF2Q01130 221 aaKnown RBP6.58□□□□□ -1.36
SNHG1-224ENST00000545688 PDCD4Q53EL6 469 aaKnown RBP6.58□□□□□ -1.36
SNHG1-224ENST00000545688 Q6ZVL8 140 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 OR7D4Q8NG98 312 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 SCOCQ9UIL1 159 aa6.58□□□□□ -1.36
SNHG1-224ENST00000545688 CXorf49A8MYA2 514 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-224ENST00000545688 DIRC3C9JPN6 131 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 GCP02774 474 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 RBP3P10745 1247 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 MGAT1P26572 445 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 FAM47AQ5JRC9 791 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 ZNF572Q7Z3I7 529 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-224ENST00000545688 PLXDC1Q8IUK5 500 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 FATE1Q969F0 183 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 ACE2Q9BYF1 805 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-224ENST00000545688 KRTAP17-1Q9BYP8 105 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 BCO1Q9HAY6 547 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 DMRT3Q9NQL9 472 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 ANKFY1Q9P2R3 1169 aa6.57□□□□□ -1.36
SNHG1-224ENST00000545688 COL4A3Q01955 1670 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 GAGE12HA6NDE8 117 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 TMEM200CA6NKL6 621 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 PRKD3O94806 890 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 NDUFA10O95299 355 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 VIL1P09327 827 aaKnown RBP6.56□□□□□ -1.36
SNHG1-224ENST00000545688 MTHFD2P13995 350 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 CNGA1P29973 690 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 ECHS1P30084 290 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 FAM102AQ5T9C2 384 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-224ENST00000545688 METRNLQ641Q3 311 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 KRT26Q7Z3Y9 468 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 GPR150Q8NGU9 434 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 ZFP28Q8NHY6 868 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 ZG16BQ96DA0 208 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 AHCYL2Q96HN2 611 aaKnown RBP6.56□□□□□ -1.36
SNHG1-224ENST00000545688 NEU1Q99519 415 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 GREM2Q9H772 168 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
SNHG1-224ENST00000545688 PJA2O43164 708 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 GPR39O43194 453 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 B3GALT2O43825 422 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 ALOX15P16050 662 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 CPEP16870 476 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 ZEB1P37275 1124 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 GPR3P46089 330 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 CHN2P52757 468 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 CLRN1P58418 232 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 NANOS3P60323 173 aaKnown RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 PPP3CAQ08209 521 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 MUM1L1Q5H9M0 696 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 ATXN7L2Q5T6C5 722 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 BEND2Q8NDZ0 799 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 COG1Q8WTW3 980 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 HOXB13Q92826 284 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 UHRF1Q96T88 793 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 FAM126AQ9BYI3 521 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 WDR11Q9BZH6 1224 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 SERHL2Q9H4I8 314 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 RBM12Q9NTZ6 932 aaKnown RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 CCM2LQ9NUG4 571 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 USP15Q9Y4E8 981 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-224ENST00000545688 ATRNL1Q5VV63 1379 aa6.55□□□□□ -1.36
SNHG1-224ENST00000545688 DRGXA6NNA5 263 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 SPATA31D3P0C874 917 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 SREBF1P36956 1147 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 RAP2BP61225 183 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 FAPQ12884 760 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 ANO4Q32M45 955 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 HECTD2Q5U5R9 776 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 Q6YL49 198 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 SPATA31D4Q6ZUB0 917 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 SPATS2Q86XZ4 545 aaKnown RBP6.54□□□□□ -1.36
SNHG1-224ENST00000545688 ARHGEF19Q8IW93 802 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 PQLC1Q8N2U9 271 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 CPEB3Q8NE35 698 aaKnown RBP6.54□□□□□ -1.36
SNHG1-224ENST00000545688 WDR66Q8TBY9 1149 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 ADAM2Q99965 735 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 DNAJC28Q9NX36 388 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 PACSIN3Q9UKS6 424 aa6.54□□□□□ -1.36
SNHG1-224ENST00000545688 PNPLA7Q6ZV29 1317 aa6.53□□□□□ -1.36
SNHG1-224ENST00000545688 UNC119BA6NIH7 251 aa6.53□□□□□ -1.36
SNHG1-224ENST00000545688 CLSTN1O94985 981 aa6.53□□□□□ -1.36
SNHG1-224ENST00000545688 SNRPA1P09661 255 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms