RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 LDHAP00338 332 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CLTAP09496 248 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 MLH1P40692 756 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ACOT2P49753 483 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CYP2J2P51589 502 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CLLU1OSQ5K130 101 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TMEM192Q8IY95 271 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 URGCPQ8TCY9 931 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 DHTKD1Q96HY7 919 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RPS6KC1Q96S38 1066 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GAD1Q99259 594 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RAD9AQ99638 391 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TSG101Q99816 390 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 FAM213AQ9BRX8 229 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RPF1Q9H9Y2 349 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TOPORSQ9NS56 1045 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HSPBP1Q9NZL4 362 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GOLGA8IPA6NC78 632 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ARL5CA6NH57 179 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GOLGA8JA6NMD2 632 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TDRD15B5MCY1 1934 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 PPP1R3GB7ZBB8 358 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 OFD1O75665 1012 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TNFSF9P41273 254 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 NLRP12P59046 1061 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 HTRA4P83105 476 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TRIP11Q15643 1979 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 ZBTB41Q5SVQ8 909 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 GPD1LQ8N335 351 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 MLKLQ8NB16 471 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 P2RX5Q93086 422 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 RNF19AQ9NV58 838 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 DACH1Q9UI36 760 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 CTNND2Q9UQB3 1225 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 TRAF3IP3Q9Y228 551 aa15.78■□□□□ 0.12
TNFRSF1A-216ENST00000543995 EXTL3O43909 919 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LETM1O95202 739 aaPredicted RBP15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NR3C1P04150 777 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RPL13P26373 211 aaKnown RBP15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PAK1Q13153 545 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 DPCR1Q3MIW9 517 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NOMO2Q5JPE7 1267 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 C12orf56Q8IXR9 622 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 XXYLT1Q8NBI6 393 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZSWIM2Q8NEG5 633 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZNF689Q96CS4 500 aaPredicted RBP15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FAM212AQ96EL1 285 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZFP42Q96MM3 310 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MSRAQ9UJ68 235 aa15.77■□□□□ 0.11
TNFRSF1A-216ENST00000543995 BICDL2A1A5D9 508 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TRIM49BA6NDI0 452 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FAM189A1O60320 539 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 EXOC3O60645 756 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CXCL8P10145 99 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MYOGP15173 224 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NR2F2P24468 414 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CCNE1P24864 410 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PBX2P40425 430 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RNASELQ05823 741 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PPP2R3AQ06190 1150 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RAB30Q15771 203 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CENPPQ6IPU0 288 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RDH13Q8NBN7 331 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RSPH1Q8WYR4 309 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SNX27Q96L92 541 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CASD1Q96PB1 797 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MRPL9Q9BYD2 267 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PBX4Q9BYU1 374 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 KANSL3Q9P2N6 904 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CPSF3Q9UKF6 684 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PCDHA11Q9Y5I1 949 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RALGAPA2Q2PPJ7 1873 aa15.76■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SYCE3A1L190 88 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 POMCP01189 267 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SCNN1GP51170 649 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 AFF1P51825 1210 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 STX17P56962 302 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LRRC63Q05C16 580 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 HSP90AA2PQ14568 343 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 STX1AQ16623 288 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SLC10A6Q3KNW5 377 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LRIT3Q3SXY7 679 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZCWPW2Q504Y3 356 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 GLRA4Q5JXX5 417 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SPOUT1Q5T280 376 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CEP135Q66GS9 1140 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CRELD2Q6UXH1 353 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LRRC43Q8N309 656 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FAM193BQ96PV7 902 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RC3H2Q9HBD1 1191 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms