RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	PANK4	Q9NVE7	773 aa		12.11	□□□□□ -0.47
DDB1-222	ENST00000543627	TBX20	Q9UMR3	447 aa		12.11	□□□□□ -0.47
DDB1-222	ENST00000543627	KIAA1671	Q9BY89	1806 aa		12.11	□□□□□ -0.47
DDB1-222	ENST00000543627	TRANK1	O15050	2925 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	MYH11	P35749	1972 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	REV3L	O60673	3130 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	MYH15	Q9Y2K3	1946 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627		A0A1B0GVL5	298 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	HNRNPDL	O14979	420 aa	Known RBP	12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	LINC01565	O15544	149 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	TADA2A	O75478	443 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	GCNT3	O95395	438 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	TH	P07101	528 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	NDUFV1	P49821	464 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	KCNQ1	P51787	676 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	ASIC1	P78348	528 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	NUCB2	P80303	420 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	AMPD3	Q01432	767 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	PLCB3	Q01970	1234 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	HYAL1	Q12794	435 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	COLGALT2	Q8IYK4	626 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	CEP57L1	Q8IYX8	460 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	LEO1	Q8WVC0	666 aa	Predicted RBP	12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	IGSF21	Q96ID5	467 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	ACAP3	Q96P50	834 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	TMEM175	Q9BSA9	504 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	COLEC11	Q9BWP8	271 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	LRRC27	Q9C0I9	530 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	BLZF1	Q9H2G9	400 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	UBE2Z	Q9H832	354 aa	Predicted RBP	12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	KCNH3	Q9ULD8	1083 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	COG5	Q9UP83	839 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	MYO7A	Q13402	2215 aa		12.1	□□□□□ -0.47
DDB1-222	ENST00000543627	PLXNA4	Q9HCM2	1894 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	HIDE1	A8MVS5	230 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627		F8W810	466 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	TOM1L1	O75674	476 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	MYB	P10242	640 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	MCF2	P10911	925 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	CASP1	P29466	404 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	SPAG1	Q07617	926 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	GRIK3	Q13003	919 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	SMC1A	Q14683	1233 aa	Known RBP	12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	AAK1	Q2M2I8	961 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	RESP18	Q5W5W9	173 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	KIAA1841	Q6NSI8	718 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	CCDC65	Q8IXS2	484 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	SYCP3	Q8IZU3	236 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	RSPH1	Q8WYR4	309 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	HPS3	Q969F9	1004 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	ASB2	Q96Q27	587 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	APOL5	Q9BWW9	433 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	SERTAD1	Q9UHV2	236 aa		12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.09	□□□□□ -0.47
DDB1-222	ENST00000543627	UNC80	Q8N2C7	3258 aa		12.08	□□□□□ -0.47
DDB1-222	ENST00000543627	GOLGA6L4	A6NEF3	574 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	SPDYE4	A6NLX3	237 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	PRPF6	O94906	941 aa	Known RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	GAP43	P17677	238 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	ANP32A	P39687	249 aa	Known RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	GRM5	P41594	1212 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	ZNF131	P52739	623 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	RBM10	P98175	930 aa	Known RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	TUSC3	Q13454	348 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	TJAP1	Q5JTD0	557 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	TAS1R1	Q7RTX1	841 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	ZNF720	Q7Z2F6	126 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	DDX53	Q86TM3	631 aa	Known RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	CEP57	Q86XR8	500 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	GRAMD1C	Q8IYS0	662 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	GSTCD	Q8NEC7	633 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	DNAJC19	Q96DA6	116 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	PABPC5	Q96DU9	382 aa	Known RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	B3GALT6	Q96L58	329 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	PAAF1	Q9BRP4	392 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	MSTO1	Q9BUK6	570 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	TNMD	Q9H2S6	317 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	IKZF4	Q9H2S9	585 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	GOLGA2P5	Q9HBQ8	144 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	PTPRH	Q9HD43	1115 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	NGRN	Q9NPE2	291 aa	Known RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	LZTS1	Q9Y250	596 aa		12.08	□□□□□ -0.48
DDB1-222	ENST00000543627	CARNS1	A5YM72	827 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	TISP43	B9A030	160 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	ANKRD63	C9JTQ0	380 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	PTGES	O14684	152 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	NCK2	O43639	380 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	PFKFB1	P16118	471 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	TNFSF9	P41273	254 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	GTF2B	Q00403	316 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	DLX2	Q07687	328 aa	Predicted RBP	12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	E2F4	Q16254	413 aa		12.07	□□□□□ -0.48
DDB1-222	ENST00000543627	ADAL	Q6DHV7	355 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms