RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SYNGAP1Q96PV0 1343 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GOLGA6L10A0A0M3HER8 536 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ARHGEF35A5YM69 484 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 IPO5O00410 1097 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 EXOC3O60645 756 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PHF2O75151 1096 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 RTN2O75298 545 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 FTLP02792 175 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MMP10P09238 476 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GZMAP12544 262 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 KRT13P13646 458 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CHRNB2P17787 502 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ITGB5P18084 799 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ABCB4P21439 1286 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CHRNA3P32297 505 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GBP1P32455 592 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GPC5P78333 572 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DLG4P78352 724 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GTF2BQ00403 316 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DR1Q01658 176 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PPP3CAQ08209 521 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DRP2Q13474 957 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PLCB4Q15147 1175 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CRTC2Q53ET0 693 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DNAJC14Q6Y2X3 702 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 SAMD7Q7Z3H4 446 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 JAMLQ86YT9 394 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ARHGEF19Q8IW93 802 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM71AQ8IYT1 594 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ZDHHC14Q8IZN3 488 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 OTUD6BQ8N6M0 293 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PRELID2Q8N945 189 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM174AQ8TBP5 190 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PLEKHO2Q8TD55 490 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MORC4Q8TE76 937 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 SLC20A1Q8WUM9 679 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 UBLCP1Q8WVY7 318 aaPredicted RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM151AQ8WW52 585 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 RAPGEF5Q92565 580 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 HOOK2Q96ED9 719 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PGM2Q96G03 612 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 FMO2Q99518 471 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ZSWIM1Q9BR11 485 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 TMEM109Q9BVC6 243 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DPH5Q9H2P9 285 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PABPC3Q9H361 631 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 VCPKMTQ9H867 229 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CNOT10Q9H9A5 744 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 LRRC4CQ9HCJ2 640 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 IGSF5Q9NSI5 407 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GRHL1Q9NZI5 618 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CNOT7Q9UIV1 285 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 NOCTQ9UK39 431 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ZBTB21Q9ULJ3 1066 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CNTNAP1P78357 1384 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 MYH11P35749 1972 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 EMSYQ7Z589 1322 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 YDJCA8MPS7 323 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 DCDC2CA8MYV0 355 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 E7EVH7 732 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 KIAA0754O94854 1291 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 CYP1A2P05177 515 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 SKIP12755 728 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 PLS3P13797 630 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 TMOD1P28289 359 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 HNRNPH1P31943 449 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 HPDP32754 393 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 RARRES1P49788 294 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 VAMP7P51809 220 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 UBXN2AP68543 259 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ACTN3Q08043 901 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ZNF211Q13398 564 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 BYSLQ13895 437 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ARHGAP44Q17R89 818 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ZNF568Q3ZCX4 644 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 TNFAIP8L3Q5GJ75 292 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 MORN1Q5T089 497 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ERMARDQ5T6L9 678 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 CCDC174Q6PII3 467 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 KCNV1Q6PIU1 500 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ARMC9Q7Z3E5 817 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 LDHDQ86WU2 507 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 SYCP3Q8IZU3 236 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 KRT35Q92764 455 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 GLG1Q92896 1179 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ZNF622Q969S3 477 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 ACCSQ96QU6 501 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 PCDHB18PQ96TA0 734 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 GMLQ99445 158 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 PSMD1Q99460 953 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 TIPINQ9BVW5 301 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM129AQ9BZQ8 928 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 WNT8AQ9H1J5 351 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 UBE2TQ9NPD8 197 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 LARSQ9P2J5 1176 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 DDX20Q9UHI6 824 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 FEM1BQ9UK73 627 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 SLC27A5Q9Y2P5 690 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms