RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 NUP58Q9BVL2 599 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 TTYH3Q9C0H2 523 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 CCDC113Q9H0I3 377 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 PADI3Q9ULW8 664 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 ST3GAL5Q9UNP4 418 aa30.22■■■□□ 2.43
CCM2-218ENST00000541586 TTC26A0AVF1 554 aa30.21■■■□□ 2.43
CCM2-218ENST00000541586 PARNO95453 639 aaKnown RBP30.21■■■□□ 2.43
CCM2-218ENST00000541586 TRIM21P19474 475 aaKnown RBP30.21■■■□□ 2.43
CCM2-218ENST00000541586 GARTP22102 1010 aa30.21■■■□□ 2.43
CCM2-218ENST00000541586 MBTD1Q05BQ5 628 aa30.21■■■□□ 2.43
CCM2-218ENST00000541586 KCNMA1Q12791 1236 aa30.21■■■□□ 2.43
CCM2-218ENST00000541586 PAK2Q13177 524 aa30.21■■■□□ 2.43
CCM2-218ENST00000541586 NFKBIZQ9BYH8 718 aa30.21■■■□□ 2.43
CCM2-218ENST00000541586 IFIH1Q9BYX4 1025 aaKnown RBP30.21■■■□□ 2.43
CCM2-218ENST00000541586 MAPK13O15264 365 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 EDN1P05305 212 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 ACRP10323 421 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 MAPK6Q16659 721 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 CCDC112Q8NEF3 446 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 SAAL1Q96ER3 474 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 PANX2Q96RD6 677 aa30.2■■■□□ 2.43
CCM2-218ENST00000541586 GOLGA8IPA6NC78 632 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 GOLGA8JA6NMD2 632 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 GPR182O15218 404 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 BFSP1Q12934 665 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 FIGNQ5HY92 759 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 INTS8Q75QN2 995 aaKnown RBP30.19■■■□□ 2.42
CCM2-218ENST00000541586 IFNLR1Q8IU57 520 aaPredicted RBP30.19■■■□□ 2.42
CCM2-218ENST00000541586 USP38Q8NB14 1042 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 KIAA1524Q8TCG1 905 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 MMRN2Q9H8L6 949 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 CAPN11Q9UMQ6 739 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 STYXL1Q9Y6J8 313 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 SCN5AQ14524 2016 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 NRDCO43847 1150 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 ERLIN2O94905 339 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 TMEM139Q8IV31 216 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 DBF4BQ8NFT6 615 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 TARS2Q9BW92 718 aaKnown RBP30.19■■■□□ 2.42
CCM2-218ENST00000541586 FAM207AQ9NSI2 230 aaPredicted RBP30.19■■■□□ 2.42
CCM2-218ENST00000541586 SQORQ9Y6N5 450 aa30.19■■■□□ 2.42
CCM2-218ENST00000541586 PRKCBP05771 671 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 KRT13P13646 458 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 FPGSQ05932 587 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 TMEM132AQ24JP5 1023 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 CCDC51Q96ER9 411 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 FBXL18Q96ME1 805 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 CRACR2AQ9BSW2 395 aa30.18■■■□□ 2.42
CCM2-218ENST00000541586 RFC2P35250 354 aa30.17■■■□□ 2.42
CCM2-218ENST00000541586 KRT9P35527 623 aa30.17■■■□□ 2.42
CCM2-218ENST00000541586 SNRNP35Q16560 246 aaKnown RBP30.17■■■□□ 2.42
CCM2-218ENST00000541586 CBWD2Q8IUF1 395 aa30.17■■■□□ 2.42
CCM2-218ENST00000541586 RPUSD2Q8IZ73 545 aaKnown RBP30.17■■■□□ 2.42
CCM2-218ENST00000541586 IQCDQ96DY2 449 aa30.17■■■□□ 2.42
CCM2-218ENST00000541586 BAG1Q99933 345 aaPredicted RBP30.17■■■□□ 2.42
CCM2-218ENST00000541586 FZD8Q9H461 694 aa30.17■■■□□ 2.42
CCM2-218ENST00000541586 ABHD10Q9NUJ1 306 aa30.17■■■□□ 2.42
CCM2-218ENST00000541586 LUC7L2Q9Y383 392 aaKnown RBP30.17■■■□□ 2.42
CCM2-218ENST00000541586 EPHB6O15197 1021 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 ADRB2P07550 413 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 TRIM49P0CI25 452 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 TRIM49CP0CI26 452 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 MLLT1Q03111 559 aaPredicted RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 PLEKHG4Q58EX7 1191 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 CPB2Q96IY4 423 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 PRMT7Q9NVM4 692 aaPredicted RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 B4GALT5O43286 388 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 CXCL10P02778 98 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 VAMP7P51809 220 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 NCBP1Q09161 790 aaKnown RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 PPIGQ13427 754 aaKnown RBP eCLIP30.16■■■□□ 2.42
CCM2-218ENST00000541586 ZPBP2Q6X784 338 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 GPD1LQ8N335 351 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 C17orf53Q8N3J3 647 aaPredicted RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 SEPT8Q92599 483 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 ZBTB45Q96K62 511 aaPredicted RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 MRPL4Q9BYD3 311 aaKnown RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 ERVK-5Q9HDB9 667 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 AGPAT5Q9NUQ2 364 aa30.16■■■□□ 2.42
CCM2-218ENST00000541586 PIN4Q9Y237 131 aaKnown RBP30.16■■■□□ 2.42
CCM2-218ENST00000541586 A0A1W2PQJ5 194 aa30.15■■■□□ 2.42
CCM2-218ENST00000541586 TTLL13PA6NNM8 815 aa30.15■■■□□ 2.42
CCM2-218ENST00000541586 PRPF4BQ13523 1007 aaKnown RBP30.15■■■□□ 2.42
CCM2-218ENST00000541586 SLFN12LQ6IEE8 588 aa30.15■■■□□ 2.42
CCM2-218ENST00000541586 HAPLN2Q9GZV7 340 aa30.15■■■□□ 2.42
CCM2-218ENST00000541586 IL23AQ9NPF7 189 aa30.15■■■□□ 2.42
CCM2-218ENST00000541586 TET1Q8NFU7 2136 aa30.15■■■□□ 2.42
CCM2-218ENST00000541586 ACKR2O00590 384 aa30.14■■■□□ 2.42
CCM2-218ENST00000541586 STX10O60499 249 aa30.14■■■□□ 2.42
CCM2-218ENST00000541586 DLG4P78352 724 aa30.14■■■□□ 2.42
CCM2-218ENST00000541586 CDR2LQ86X02 465 aaPredicted RBP30.14■■■□□ 2.42
CCM2-218ENST00000541586 NEK11Q8NG66 645 aa30.14■■■□□ 2.42
CCM2-218ENST00000541586 PLEKHO2Q8TD55 490 aa30.14■■■□□ 2.42
CCM2-218ENST00000541586 VWCEQ96DN2 955 aa30.14■■■□□ 2.42
CCM2-218ENST00000541586 LSM14BQ9BX40 385 aaKnown RBP30.14■■■□□ 2.42
CCM2-218ENST00000541586 H0YGN5 161 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 ZNF500O60304 480 aaPredicted RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 TSPAN1O60635 241 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 FMO5P49326 533 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 MCCD1P59942 119 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms