RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ALDH1A2O94788 518 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 MANFP55145 182 aaKnown RBP5.29□□□□□ -1.56
SNHG1-217ENST00000541578 NRG3P56975 720 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 CRHR2Q13324 411 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 ZRSR2Q15696 482 aaKnown RBP5.29□□□□□ -1.56
SNHG1-217ENST00000541578 ELAVL1Q15717 326 aaKnown RBP5.29□□□□□ -1.56
SNHG1-217ENST00000541578 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 FKBP15Q5T1M5 1219 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 MFSD5Q6N075 450 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 TSHZ1Q6ZSZ6 1077 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 UNC5BQ8IZJ1 945 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 CBARPQ8N350 705 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-217ENST00000541578 TTC17Q96AE7 1141 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 NMRK2Q9NPI5 230 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNHG1-217ENST00000541578 ING3Q9NXR8 418 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 SRRDQ9UH36 339 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 FRMPD2Q68DX3 1309 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 NRP1O14786 923 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 PRPF3O43395 683 aaKnown RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 MFAP3LO75121 409 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 SEC24DO94855 1032 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 LY86O95711 162 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 RBP3P10745 1247 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 PPARAQ07869 468 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 SPIDRQ14159 915 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 IFIT1BQ5T764 474 aaKnown RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 CCDC62Q6P9F0 684 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 MIER2Q8N344 545 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 PIK3C3Q8NEB9 887 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 ACAP3Q96P50 834 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 NUP88Q99567 741 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 ZNF703Q9H7S9 590 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 TCF7L1Q9HCS4 588 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 SAP30BPQ9UHR5 308 aaKnown RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 TMPRSS11EQ9UL52 423 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 PPP2R3BQ9Y5P8 575 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 HS3ST3A1Q9Y663 406 aa5.28□□□□□ -1.56
SNHG1-217ENST00000541578 URB2Q14146 1524 aaKnown RBP5.28□□□□□ -1.56
SNHG1-217ENST00000541578 ARAP1Q96P48 1450 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 NPIPB8E9PQR5 432 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 CHD1O14646 1710 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 OFD1O75665 1012 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 C1SP09871 688 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 CLEC2LP0C7M8 214 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 ACVRL1P37023 503 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 SCNN1GP51170 649 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 KRT85P78386 507 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 DGCR2P98153 550 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 PTH1RQ03431 593 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 MGAT5Q09328 741 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 CNGB1Q14028 1251 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-217ENST00000541578 VPS72Q15906 364 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 LSM12Q3MHD2 195 aaKnown RBP5.27□□□□□ -1.57
SNHG1-217ENST00000541578 TAS1R1Q7RTX1 841 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 TMPRSS6Q8IU80 811 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 LYSMD2Q8IV50 215 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 GLB1L2Q8IW92 636 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 ELOA2Q8IYF1 753 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-217ENST00000541578 ZNF512Q96ME7 567 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-217ENST00000541578 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 FDXACB1Q9BRP7 624 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-217ENST00000541578 ZNF700Q9H0M5 742 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 MAN1C1Q9NR34 630 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 PARPBPQ9NWS1 579 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 DNAJC28Q9NX36 388 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 PRSS50Q9UI38 385 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 ZBTB21Q9ULJ3 1066 aa5.27□□□□□ -1.57
SNHG1-217ENST00000541578 A0A1W2PR48 441 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 CYR61O00622 381 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 IPO13O94829 963 aaKnown RBP5.26□□□□□ -1.57
SNHG1-217ENST00000541578 MAN2A2P49641 1150 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 INAVAQ3KP66 663 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 COBLL1Q53SF7 1204 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 HSP90AB4PQ58FF6 505 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 Q6ZRM9 215 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 CMTR2Q8IYT2 770 aaKnown RBP5.26□□□□□ -1.57
SNHG1-217ENST00000541578 OR5M3Q8NGP4 307 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 OR14C36Q8NHC7 312 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 FBXO41Q8TF61 875 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 TGFBRAP1Q8WUH2 860 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 CACTINQ8WUQ7 758 aaKnown RBP5.26□□□□□ -1.57
SNHG1-217ENST00000541578 SCAND2PQ9GZW5 306 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-217ENST00000541578 EPC1Q9H2F5 836 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 TOPORSQ9NS56 1045 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-217ENST00000541578 FAM50BQ9Y247 325 aa5.26□□□□□ -1.57
SNHG1-217ENST00000541578 HMGB1P1B2RPK0 211 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 HOXA3O43365 443 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 CTNND1O60716 968 aaKnown RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 FOSP01100 380 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 TRIM27P14373 513 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 GNAT2P19087 354 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 LGALS4P56470 323 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 TRIM25Q14258 630 aaKnown RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 PDCD1Q15116 288 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 UBE3CQ15386 1083 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms