RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RDH13Q8NBN7 331 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 SLC10A4Q96EP9 437 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 HES6Q96HZ4 224 aa18.5■□□□□ 0.55
SPIDR-227ENST00000541342 SUCLA2Q9P2R7 463 aaPredicted RBP18.5■□□□□ 0.55
SPIDR-227ENST00000541342 SRRM3A6NNA2 597 aaPredicted RBP18.49■□□□□ 0.55
SPIDR-227ENST00000541342 TTI1O43156 1089 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 EXOC3O60645 756 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 CYP2C8P10632 490 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 PEX26Q7Z412 305 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 TMC3Q7Z5M5 1100 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 LNX1Q8TBB1 728 aaPredicted RBP18.49■□□□□ 0.55
SPIDR-227ENST00000541342 TMEM174Q8WUU8 243 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 PPANQ9NQ55 473 aaKnown RBP18.49■□□□□ 0.55
SPIDR-227ENST00000541342 GCNT4Q9P109 453 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 ATP8B3O60423 1300 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 DNAJC25-GNG10A0A024R161 153 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 TRIM49P0CI25 452 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 TRIM49CP0CI26 452 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 TMOD1P28289 359 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 SWT1Q5T5J6 900 aaKnown RBP18.49■□□□□ 0.55
SPIDR-227ENST00000541342 DCAF12L1Q5VU92 463 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 CYFIP2Q96F07 1278 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 ZNF302Q9NR11 478 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 A0A0A6YYK5 440 aaPredicted RBP18.49■□□□□ 0.55
SPIDR-227ENST00000541342 CCDC169A6NNP5 214 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 MYBPC2Q14324 1141 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 IFI16Q16666 785 aaKnown RBP18.49■□□□□ 0.55
SPIDR-227ENST00000541342 QPCTQ16769 361 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 CBWD6Q4V339 395 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 CBWD3Q5JTY5 395 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 CBWD5Q5RIA9 395 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 SLC30A5Q8TAD4 765 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 PCYT2Q99447 389 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 OSGEPQ9NPF4 335 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
SPIDR-227ENST00000541342 IGKV6D-21A0A0A0MT36 114 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 TMCO5BA8MYB1 307 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 DGAT1O75907 488 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 KIAA0754O94854 1291 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 DMP1Q13316 513 aaPredicted RBP18.48■□□□□ 0.55
SPIDR-227ENST00000541342 SPRED3Q2MJR0 410 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 XKR3Q5GH77 459 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 C12orf56Q8IXR9 622 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 KIFAP3Q92845 792 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 LRRC45Q96CN5 670 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 TBX20Q9UMR3 447 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 GTPBP10A4D1E9 387 aaKnown RBP18.48■□□□□ 0.55
SPIDR-227ENST00000541342 GRIN3BO60391 1043 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 ARIH2O95376 493 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 FMO5P49326 533 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 LY6KQ17RY6 165 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 MTERF2Q49AM1 385 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 ATP8B4Q8TF62 1192 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 CEP89Q96ST8 783 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 NTPCRQ9BSD7 190 aaKnown RBP18.48■□□□□ 0.55
SPIDR-227ENST00000541342 TRAPPC3O43617 180 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 H2AFZP0C0S5 128 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 BFSP1Q12934 665 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 IFT88Q13099 833 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 H2AFVQ71UI9 128 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 DAAM2Q86T65 1068 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 MMP19Q99542 508 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 PORCNQ9H237 461 aa18.48■□□□□ 0.55
SPIDR-227ENST00000541342 GOLGA6L10A6NI86 522 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 ANKRD63C9JTQ0 380 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 CCDC188H7C350 402 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 DLG4P78352 724 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 KMT5AQ9NQR1 393 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 GGA2Q9UJY4 613 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 GFPT2O94808 682 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 ANXA13P27216 316 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 ADSSP30520 456 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 GALCP54803 685 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 PPP2R5AQ15172 486 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 MAP4K3Q8IVH8 894 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 U2AF1L4Q8WU68 220 aaKnown RBP18.47■□□□□ 0.55
SPIDR-227ENST00000541342 UBLCP1Q8WVY7 318 aaPredicted RBP18.47■□□□□ 0.55
SPIDR-227ENST00000541342 SPIRE2Q8WWL2 714 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 SYT11Q9BT88 431 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 ATP6V0A4Q9HBG4 840 aa18.47■□□□□ 0.55
SPIDR-227ENST00000541342 PCNTO95613 3336 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 DENND3A2RUS2 1198 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 OATP04181 439 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 SMTNP53814 917 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 MKRN3Q13064 507 aaKnown RBP18.46■□□□□ 0.55
SPIDR-227ENST00000541342 BYSLQ13895 437 aaKnown RBP18.46■□□□□ 0.55
SPIDR-227ENST00000541342 ILDR2Q71H61 639 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 SLC17A8Q8NDX2 589 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 MS4A4AQ96JQ5 239 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 TXLNGYQ9BZA5 131 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 SLITRK6Q9H5Y7 841 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 DDX20Q9UHI6 824 aaKnown RBP18.46■□□□□ 0.55
SPIDR-227ENST00000541342 EVI5O60447 810 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 BUB1BO60566 1050 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-227ENST00000541342 BIRC3Q13489 604 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 GPR88Q9GZN0 384 aa18.46■□□□□ 0.55
SPIDR-227ENST00000541342 C17orf75Q9HAS0 396 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms