RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 SYNGAP1Q96PV0 1343 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 SFI1A8K8P3 1242 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 LGR5O75473 907 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 CBX6O95503 412 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 ALAS1P13196 640 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 TNFAIP3P21580 790 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 GIT2Q14161 759 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 TRIP13Q15645 432 aaPredicted RBP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 SLC20A1Q8WUM9 679 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 ROPN1BQ9BZX4 212 aaPredicted RBP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 DHX36Q9H2U1 1008 aaKnown RBP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 ROPN1Q9HAT0 212 aaPredicted RBP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 IRAK4Q9NWZ3 460 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 CHRNB2P17787 502 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 ZNF568Q3ZCX4 644 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 ZNF746Q6NUN9 644 aaPredicted RBP15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 SYT11Q9BT88 431 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 TBC1D10AQ9BXI6 508 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 TXLNGQ9NUQ3 528 aa15.89■□□□□ 0.13
AC005840.4-201ENST00000541242 ATP8B3O60423 1300 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 KDM3AQ9Y4C1 1321 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 DDTLA6NHG4 134 aaPredicted RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 USP17L10C9JJH3 530 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 COMTP21964 271 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 SP100P23497 879 aaPredicted RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 ANXA13P27216 316 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 HOXA7P31268 230 aaPredicted RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 SKIV2L2P42285 1042 aaKnown RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 MRPS35P82673 323 aaKnown RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 ROR2Q01974 943 aaKnown RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 DNAJC3Q13217 504 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 MFN1Q8IWA4 741 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 ASAP3Q8TDY4 903 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 C1orf54Q8WWF1 131 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 MAGEB18Q96M61 343 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 RUNDC3BQ96NL0 473 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 SERPINB12Q96P63 405 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 ZSWIM1Q9BR11 485 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 LRMDAQ9H2I8 198 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 SLCO1B3Q9NPD5 702 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 DLATP10515 647 aaKnown RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 POLD1P28340 1107 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 CALCOCO2Q13137 446 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 HYIQ5T013 277 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 RBM26Q5T8P6 1007 aaKnown RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 ZDHHC15Q96MV8 337 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 DENND2DQ9H6A0 471 aaPredicted RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 ASB3Q9Y575 518 aa15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 GREB1LQ9C091 1923 aaPredicted RBP15.88■□□□□ 0.13
AC005840.4-201ENST00000541242 CALUO43852 315 aaPredicted RBP15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 SPAG7O75391 227 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 GCNT3O95395 438 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 HLA-DOAP06340 250 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 T-ENOLP0DO92 83 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 POLE2P56282 527 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 KLC1Q07866 573 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 TRAF1Q13077 416 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 CBWD6Q4V339 395 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 CBWD3Q5JTY5 395 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 CBWD5Q5RIA9 395 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 SEL1L2Q5TEA6 688 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 SH3BP5LQ7L8J4 393 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 PODNQ7Z5L7 613 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 UBL4BQ8N7F7 174 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 DNAJC9Q8WXX5 260 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 SLC7A6OSQ96CW6 309 aaPredicted RBP15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 TAOK3Q9H2K8 898 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 FAM198AQ9UFP1 575 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 SIPA1L1O43166 1804 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 SLX4Q8IY92 1834 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 MYO3BQ8WXR4 1341 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 PASKQ96RG2 1323 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 ANKRD62A6NC57 917 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 hCG_1984214I3L0E3 225 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 NPTXRO95502 500 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 TRIM49P0CI25 452 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 TRIM49CP0CI26 452 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 VPS41P49754 854 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 POLGP54098 1239 aaPredicted RBP15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 COG2Q14746 738 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 PARP6Q2NL67 630 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 MUM1Q2TAK8 710 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 TRMT10CQ7L0Y3 403 aaKnown RBP15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 ZNF713Q8N859 430 aaPredicted RBP15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 RUSC1Q9BVN2 902 aa15.87■□□□□ 0.13
AC005840.4-201ENST00000541242 PDXKO00764 312 aa15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 CHRNA5P30532 468 aa15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 WDR4P57081 412 aaKnown RBP15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 KRT17Q04695 432 aa15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 SIX1Q15475 284 aaPredicted RBP15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 DACT2Q5SW24 774 aa15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 FOXB2Q5VYV0 432 aa15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 RFWD3Q6PCD5 774 aa15.86■□□□□ 0.13
AC005840.4-201ENST00000541242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms