RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ANKRD33Q7Z3H0 272 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 NME8Q8N427 588 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 EIF3CQ99613 913 aaKnown RBP13.56□□□□□ -0.24
SMAD3-204ENST00000540846 FZD8Q9H461 694 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 NHEJ1Q9H9Q4 299 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-204ENST00000540846 FBXL5Q9UKA1 691 aa13.56□□□□□ -0.24
SMAD3-204ENST00000540846 CHRNA1P02708 482 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 PON1P27169 355 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 ARHGAP25P42331 645 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 PHKA2P46019 1235 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 MCCD1P59942 119 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-204ENST00000540846 POLR2FP61218 127 aaKnown RBP13.55□□□□□ -0.24
SMAD3-204ENST00000540846 MRPS6P82932 125 aaKnown RBP13.55□□□□□ -0.24
SMAD3-204ENST00000540846 BFSP1Q12934 665 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 FAM187BQ17R55 369 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 ZNF662Q6ZS27 426 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 INTS8Q75QN2 995 aaKnown RBP13.55□□□□□ -0.24
SMAD3-204ENST00000540846 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
SMAD3-204ENST00000540846 CBWD1Q9BRT8 395 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 OSBPL7Q9BZF2 842 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 L2HGDHQ9H9P8 463 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 GCNT4Q9P109 453 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 ARHGAP20Q9P2F6 1191 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
SMAD3-204ENST00000540846 A0A0U1RQJ8 604 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ANKRD63C9JTQ0 380 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 K7ERI5 159 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ABLIM1O14639 778 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 CSDE1O75534 798 aaKnown RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 RPLP2P05387 115 aaKnown RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 FMO5P49326 533 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 KRT83P78385 493 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 CDC42EP1Q00587 391 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 FAM26DQ5JW98 314 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 KLHDC7AQ5VTJ3 777 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ZNF710Q8N1W2 664 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 NLRP7Q8WX94 980 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ATRIPQ8WXE1 791 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 OSMRQ99650 979 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 CELF4Q9BZC1 486 aaKnown RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 SIX2Q9NPC8 291 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 LZTFL1Q9NQ48 299 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 MYO6Q9UM54 1294 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 CDY2AQ9Y6F7 541 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 SCN5AQ14524 2016 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ANK1P16157 1881 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 SSU72P8A0A1W2PR75 194 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 DYNC1I1O14576 645 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 B4GALT5O43286 388 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 CAND2O75155 1236 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 IPO7O95373 1038 aaKnown RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 LCA5LO95447 670 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 PRKCBP05771 671 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 KRT13P13646 458 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 UCHL3P15374 230 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 SLC9A1P19634 815 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ADSSP30520 456 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 GNG11P61952 73 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 APBA1Q02410 837 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-204ENST00000540846 TRIM60Q495X7 471 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ARHGAP29Q52LW3 1261 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 SFMBT2Q5VUG0 894 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 HGSNATQ68CP4 663 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 SRGAP1Q7Z6B7 1085 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 ZBTB8OSQ8IWT0 167 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 WDR24Q96S15 920 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 HAPLN2Q9GZV7 340 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 C11orf49Q9H6J7 331 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 NLRC4Q9NPP4 1024 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 TRPV2Q9Y5S1 764 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 STYXL1Q9Y6J8 313 aa13.54□□□□□ -0.24
SMAD3-204ENST00000540846 MROH7Q68CQ1 1323 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 CNTNAP2Q9UHC6 1331 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 INO80B-WBP1J3KQ70 363 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 ACKR2O00590 384 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 KIF5CO60282 957 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 SERPING1P05155 500 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 PLEKP08567 350 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 CTSHP09668 335 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 CKBP12277 381 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 ACTN1P12814 892 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 PROZP22891 400 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 EIF4A3P38919 411 aaKnown RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 KIF11P52732 1056 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms