RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 TMEM130Q8N3G9 435 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 PCSK9Q8NBP7 692 aaKnown RBP11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 CCDC112Q8NEF3 446 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 ZNF397Q8NF99 534 aaPredicted RBP11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 TRMT13Q9NUP7 481 aaKnown RBP11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 TNFSF13BQ9Y275 285 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 PTPN22Q9Y2R2 807 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 EVPLQ92817 2033 aa11.23□□□□□ -0.61
PABPC1P4-201ENST00000539977 CNTNAP2Q9UHC6 1331 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 A0A1W2PQJ5 194 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 STX10O60499 249 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 PLEKP08567 350 aaPredicted RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 DARSP14868 501 aaKnown RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 EIF4BP23588 611 aaKnown RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 CST5P28325 142 aaPredicted RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 PRMT2P55345 433 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 PSMD6Q15008 389 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 SNX17Q15036 470 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 PTGISQ16647 500 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 FAM187BQ17R55 369 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 OR5B17Q8NGF7 314 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 LMO3Q8TAP4 145 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 TAS1R2Q8TE23 839 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 PI4K2AQ9BTU6 479 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 CEP72Q9P209 647 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
PABPC1P4-201ENST00000539977 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 NRDCO43847 1150 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 CXCL8P10145 99 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 IQCEQ6IPM2 695 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 PDXDC1Q6P996 788 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 ARHGEF19Q8IW93 802 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 CCDC51Q96ER9 411 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 DEFB118Q96PH6 123 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 RNF19AQ9NV58 838 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 HES2Q9Y543 173 aa11.21□□□□□ -0.61
PABPC1P4-201ENST00000539977 A0A0U1RQJ8 604 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 A0A1B0GUA9 196 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 MEFVO15553 781 aaPredicted RBP11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 ARHGAP6O43182 974 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 STAG3L1P0CL83 205 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 THPOP40225 353 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 BIRC3Q13489 604 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 ARHGAP44Q17R89 818 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 EPC2Q52LR7 807 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 KRT39Q6A163 491 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 CYP26C1Q6V0L0 522 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 SERINC5Q86VE9 423 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 KAT5Q92993 513 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 PRIMPOLQ96LW4 560 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 GLT1D1Q96MS3 346 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 TRPV6Q9H1D0 765 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 PLCB1Q9NQ66 1216 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 ZNHIT6Q9NWK9 470 aaKnown RBP11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 PIN4Q9Y237 131 aaKnown RBP11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 NOD1Q9Y239 953 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 CDY2AQ9Y6F7 541 aa11.21□□□□□ -0.62
PABPC1P4-201ENST00000539977 A0A1W2PQ45 241 aaPredicted RBP11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 A0A1W2PQY0 241 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 FAM170AA1A519 330 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 CLSTN1O94985 981 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 NPTXRO95502 500 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 CHRNA1P02708 482 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 MRPS6P82932 125 aaKnown RBP11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 CETN1Q12798 172 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 TDRD10Q5VZ19 366 aaKnown RBP11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 USP37Q86T82 979 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 ACRBPQ8NEB7 543 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 SPAG5Q96R06 1193 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 CELF4Q9BZC1 486 aaKnown RBP11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 MTMR12Q9C0I1 747 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 RNF208Q9H0X6 261 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 CXCL16Q9H2A7 254 aa11.2□□□□□ -0.62
PABPC1P4-201ENST00000539977 UBE2TQ9NPD8 197 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms