RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 ASAP1Q9ULH1 1129 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 LRCH1Q9Y2L9 728 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 PFASO15067 1338 aa9.65□□□□□ -0.87
SNHG1-209ENST00000538654 VDRP11473 427 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 SOX5P35711 763 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PTDSS1P48651 473 aaKnown RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 CYP1B1Q16678 543 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PARP10Q53GL7 1025 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PRELID2Q8N945 189 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 SETDB2Q96T68 719 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 FAM192AQ9GZU8 254 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 IRAK4Q9NWZ3 460 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 GCNT4Q9P109 453 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 WHRNQ9P202 907 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PCDHA3Q9Y5H8 950 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 ADGRA3Q8IWK6 1321 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PDXKO00764 312 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 SLC37A4O43826 429 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 KRT18P05783 430 aaKnown RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PLCG2P16885 1265 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 ADCY7P51828 1080 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 EVX2Q03828 476 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 RRP1BQ14684 758 aaKnown RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 ZNF568Q3ZCX4 644 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 DCAF17Q5H9S7 520 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 SUSD4Q5VX71 490 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 OTUD6AQ7L8S5 288 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 ARHGAP22Q7Z5H3 698 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC105Q8IYK2 499 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 ANKRD35Q8N283 1001 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 FAM13CQ8NE31 585 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 GDAP1Q8TB36 358 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 LNX1Q8TBB1 728 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 NUDT12Q9BQG2 462 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 SYT15Q9BQS2 421 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
SNHG1-209ENST00000538654 SIX2Q9NPC8 291 aa9.64□□□□□ -0.87
SNHG1-209ENST00000538654 PDLIM1O00151 329 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 IFRD1O00458 451 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TRAFD1O14545 582 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 PLA2G4BP0C869 781 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 VHLP40337 213 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 CAV1Q03135 178 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 KNOP1Q1ED39 458 aaKnown RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC25Q86WR0 208 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 DNAAF5Q86Y56 855 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 EZH1Q92800 747 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 FGD4Q96M96 766 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC77Q9BR77 488 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 STK33Q9BYT3 514 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 MYLK2Q9H1R3 596 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 CDC42EP4Q9H3Q1 356 aaKnown RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ENAMQ9NRM1 1142 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 LGALS13Q9UHV8 139 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 STX8Q9UNK0 236 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 MAGEB2O15479 319 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 RNF8O76064 485 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TDP2O95551 362 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TNFAIP3P21580 790 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 COILP38432 576 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 MGAT5Q09328 741 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TCERG1LQ5VWI1 586 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 PCGF5Q86SE9 256 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 LONP2Q86WA8 852 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ARHGAP18Q8N392 663 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 C7orf43Q8WVR3 580 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 PIGBQ92521 554 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ALG3Q92685 438 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ERP27Q96DN0 273 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 DDX23Q9BUQ8 820 aaKnown RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 DLGAP2Q9P1A6 1054 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ZMYND8Q9ULU4 1186 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ECE2O60344 883 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 USP17L8P0C7I0 530 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 GOLGA8HP0CJ92 632 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ITIH2P19823 946 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TAC1P20366 129 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ABCB4P21439 1286 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 NR1H3Q13133 447 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 CGB2Q6NT52 195 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 SYDE1Q6ZW31 735 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 C12orf50Q8NA57 414 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-209ENST00000538654 LRRC8CQ8TDW0 803 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 SLCO2A1Q92959 643 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms