RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 FTLP02792 175 aaPredicted RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 IVLP07476 585 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 ZBTB48P10074 688 aaPredicted RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 MYBL2P10244 700 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 ABCB4P21439 1286 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 OSBPP22059 807 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 UBA1P22314 1058 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 ARL2P36404 184 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 USP8P40818 1118 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 PIK3CAP42336 1068 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 PTENP60484 403 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 SLC7A5Q01650 507 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 PPIL2Q13356 520 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 MXD4Q14582 209 aaPredicted RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 SPDYCQ5MJ68 293 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 CFAP58Q5T655 872 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 IER5Q5VY09 327 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 SLC39A4Q6P5W5 647 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 LRIG3Q6UXM1 1119 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 GADL1Q6ZQY3 521 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 C15orf39Q6ZRI6 1047 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 CYFIP1Q7L576 1253 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 FASTKD5Q7L8L6 764 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 ZBTB8OSQ8IWT0 167 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 CD302Q8IX05 232 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 C1orf131Q8NDD1 294 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 FAM76AQ8TAV0 307 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 PLEKHO2Q8TD55 490 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 HELQQ8TDG4 1101 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 ZC3H15Q8WU90 426 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 MAIP1Q8WWC4 291 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 SEPT1Q8WYJ6 367 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 BSNDQ8WZ55 320 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 CCDC127Q96BQ5 260 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 SAAL1Q96ER3 474 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 RNPC3Q96LT9 517 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 KREMEN1Q96MU8 473 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 CGRRF1Q99675 332 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 SH3GL2Q99962 352 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 FAM213AQ9BRX8 229 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 KIFC3Q9BVG8 833 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 IMPG2Q9BZV3 1241 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 THAP2Q9H0W7 228 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 MROH8Q9H579 483 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 FAM204AQ9H8W3 233 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 EPB41L5Q9HCM4 733 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 AVENQ9NQS1 362 aaPredicted RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 EHD2Q9NZN4 543 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 AGO2Q9UKV8 859 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 MTUS1Q9ULD2 1270 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 PACSIN2Q9UNF0 486 aaPredicted RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 AGTPBP1Q9UPW5 1226 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 UTP11Q9Y3A2 253 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 PCDHB2Q9Y5E7 798 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 ANK1P16157 1881 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 RALGAPA2Q2PPJ7 1873 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 GOLGA6CA6NDK9 693 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 GOLGA6L10A6NI86 522 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 UNCXA6NJT0 531 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 BHMG1C9JSJ3 638 aaPredicted RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 DDX3YO15523 660 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 SART1O43290 800 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 RAD51CO43502 376 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 ADCY3O60266 1144 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 MAFO75444 373 aaPredicted RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 RPS6KA5O75582 802 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 ZMYND10O75800 440 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 SYF2O95926 243 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 CYP1A2P05177 515 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 GLI1P08151 1106 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 GOLGA6DP0CG33 693 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 DLATP10515 647 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 CHRM1P11229 460 aaPredicted RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 KRT5P13647 590 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 CYP11B1P15538 503 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 TNNI1P19237 187 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 GLRA2P23416 452 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 CTNNA2P26232 953 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 CHRNA3P32297 505 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 MAN1A1P33908 653 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 GGCXP38435 758 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 HSPA9P38646 679 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 SLC1A1P43005 524 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 LMAN1P49257 510 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 STAT5BP51692 787 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 FMO1Q01740 532 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 SP4Q02446 784 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 PRPF4BQ13523 1007 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 TFDP1Q14186 410 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 HLTFQ14527 1009 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP28-206ENST00000538224 TARBP2Q15633 366 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 ZACNQ401N2 412 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 ACAD10Q6JQN1 1059 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 SEPT14Q6ZU15 432 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 USP50Q70EL3 339 aaPredicted RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 SV2AQ7L0J3 742 aa7.12□□□□□ -1.27
USP28-206ENST00000538224 NOP9Q86U38 636 aaKnown RBP7.12□□□□□ -1.27
USP28-206ENST00000538224 NCAPG2Q86XI2 1143 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms