RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PRIMPOLQ96LW4 560 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 MYADMQ96S97 322 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
USP28-203ENST00000537490 RHOBTB2Q9BYZ6 727 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 NT5C3AQ9H0P0 336 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 FOXP1Q9H334 677 aaPredicted RBP9.35□□□□□ -0.91
USP28-203ENST00000537490 PDZD7Q9H5P4 517 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 FNIP2Q9P278 1114 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 ADAM28Q9UKQ2 775 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 CACNA1HO95180 2353 aa9.35□□□□□ -0.91
USP28-203ENST00000537490 ARHGEF35A5YM69 484 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 ACKR2O00590 384 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 N4BP3O15049 544 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 PI15O43692 258 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 NARSO43776 548 aaKnown RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 RECQL4O94761 1208 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 PAPLNO95428 1278 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 C1RP00736 705 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 PRKCBP05771 671 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 IGFBP6P24592 240 aaPredicted RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 GBP2P32456 591 aaPredicted RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 CLCN5P51795 746 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 ORC2Q13416 577 aaPredicted RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 PRPF4BQ13523 1007 aaKnown RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 NBR1Q14596 966 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 NAB2Q15742 525 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 MAPK6Q16659 721 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 CWF19L1Q69YN2 538 aaKnown RBP9.34□□□□□ -0.91
USP28-203ENST00000537490 CYP26C1Q6V0L0 522 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 FLCNQ8NFG4 579 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 FBXO18Q8NFZ0 1043 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 ERMNQ8TAM6 284 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 HASPINQ8TF76 798 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 HDAC7Q8WUI4 952 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 KIFC3Q9BVG8 833 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 IRF2BPLQ9H1B7 796 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 C2orf40Q9H1Z8 148 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 MFSD1Q9H3U5 465 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 PLEKHA4Q9H4M7 779 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP28-203ENST00000537490 IGSF9Q9P2J2 1179 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 DPP7Q9UHL4 492 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 DUSP12Q9UNI6 340 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 ZMYM2Q9UBW7 1377 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 KMT2EQ8IZD2 1858 aa9.34□□□□□ -0.91
USP28-203ENST00000537490 CLUHO75153 1309 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 ARID2Q68CP9 1835 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 ADAM12O43184 909 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 GFRA3O60609 400 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
USP28-203ENST00000537490 ZMYND10O75800 440 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 KIF4AO95239 1232 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 THP07101 528 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 MUTP22033 750 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 CCT6AP40227 531 aaKnown RBP9.33□□□□□ -0.92
USP28-203ENST00000537490 NAMPTP43490 491 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 RBM25P49756 843 aaKnown RBP9.33□□□□□ -0.92
USP28-203ENST00000537490 TOB1P50616 345 aaPredicted RBP9.33□□□□□ -0.92
USP28-203ENST00000537490 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP28-203ENST00000537490 NT5DC1Q5TFE4 455 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 FAM171A1Q5VUB5 890 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 ELMSAN1Q6PJG2 1045 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 CEP57Q86XR8 500 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 SLC44A3Q8N4M1 653 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 ST13P5Q8NFI4 369 aaPredicted RBP9.33□□□□□ -0.92
USP28-203ENST00000537490 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 LNX1Q8TBB1 728 aaPredicted RBP9.33□□□□□ -0.92
USP28-203ENST00000537490 STAMQ92783 540 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 KIF2CQ99661 725 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 CLSTN3Q9BQT9 956 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 ADPGKQ9BRR6 497 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 TTPALQ9BTX7 342 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 BHMT2Q9H2M3 363 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 PIDD1Q9HB75 910 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 ZDHHC7Q9NXF8 308 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 EPS15L1Q9UBC2 864 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 LRWD1Q9UFC0 647 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 GDAQ9Y2T3 454 aa9.33□□□□□ -0.92
USP28-203ENST00000537490 SF3B1O75533 1304 aaKnown RBP eCLIP9.32□□□□□ -0.92
USP28-203ENST00000537490 KRBA1A5PL33 1030 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 CFHP08603 1231 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 AOC1P19801 751 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 TRAPPC10P48553 1259 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 NTHL1P78549 312 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 HMGN5P82970 282 aaKnown RBP9.32□□□□□ -0.92
USP28-203ENST00000537490 CREMQ03060 361 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 GNL2Q13823 731 aaKnown RBP9.32□□□□□ -0.92
USP28-203ENST00000537490 PPP2R5AQ15172 486 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 ATF7IP2Q5U623 682 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 CD300LGQ6UXG3 332 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 SIX5Q8N196 739 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 FAM184AQ8NB25 1140 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
USP28-203ENST00000537490 IFT74Q96LB3 600 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms