RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	TOR2A	Q5JU69	321 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	MICALCL	Q6ZW33	695 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	SPATS2	Q86XZ4	545 aa	Known RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	LYSMD2	Q8IV50	215 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	SLC41A1	Q8IVJ1	513 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	AHCYL2	Q96HN2	611 aa	Known RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	DCLRE1C	Q96SD1	692 aa	Known RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	TOR3A	Q9H497	397 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	TRHDE	Q9UKU6	1024 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	TMPRSS11E	Q9UL52	423 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	CDY2A	Q9Y6F7	541 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961		B5MCH6	92 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	CTGF	P29279	349 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	CRHR1	P34998	444 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	LGALS4	P56470	323 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	KRTAP10-7	P60409	375 aa	Predicted RBP	4.64	□□□□□ -1.67
RDX-215	ENST00000533961	ERVK-21	P61565	698 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	CDK17	Q00537	523 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	TAP1	Q03518	808 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	PPARA	Q07869	468 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	OLFML1	Q6UWY5	402 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	RHOU	Q7L0Q8	258 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	CBARP	Q8N350	705 aa	Predicted RBP	4.64	□□□□□ -1.67
RDX-215	ENST00000533961	ZNF276	Q8N554	614 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	PIK3C3	Q8NEB9	887 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	OR5M3	Q8NGP4	307 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	PROKR1	Q8TCW9	393 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	NCDN	Q9UBB6	729 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	HDAC5	Q9UQL6	1122 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	NOP58	Q9Y2X3	529 aa	Known RBP	4.64	□□□□□ -1.67
RDX-215	ENST00000533961	COX11	Q9Y6N1	276 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	WASHC2C	Q9Y4E1	1318 aa		4.64	□□□□□ -1.67
RDX-215	ENST00000533961	GAGE12B	A1L429	117 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	GAGE12H	A6NDE8	117 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	GABRD	O14764	452 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	FAM20B	O75063	409 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	MYBL2	P10244	700 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	HSP90B1	P14625	803 aa	Known RBP	4.63	□□□□□ -1.67
RDX-215	ENST00000533961	GPR3	P46089	330 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	ANAPC15	P60006	121 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	MRPS9	P82933	396 aa	Known RBP	4.63	□□□□□ -1.67
RDX-215	ENST00000533961	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
RDX-215	ENST00000533961	CLUL1	Q15846	466 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	UGT8	Q16880	541 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	ARMC6	Q6NXE6	501 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	PPM1N	Q8N819	430 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	SNX33	Q8WV41	574 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	CDC5L	Q99459	802 aa	Known RBP	4.63	□□□□□ -1.67
RDX-215	ENST00000533961	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.63	□□□□□ -1.67
RDX-215	ENST00000533961	ASPSCR1	Q9BZE9	553 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	EPC1	Q9H2F5	836 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	KCTD10	Q9H3F6	313 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	DMRT3	Q9NQL9	472 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.63	□□□□□ -1.67
RDX-215	ENST00000533961	ING3	Q9NXR8	418 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	TRPS1	Q9UHF7	1281 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	DPP7	Q9UHL4	492 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	FZD1	Q9UP38	647 aa		4.63	□□□□□ -1.67
RDX-215	ENST00000533961	KIAA0355	O15063	1070 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	PPM1G	O15355	546 aa	Predicted RBP	4.62	□□□□□ -1.67
RDX-215	ENST00000533961	B3GALT2	O43825	422 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	ABHD16A	O95870	558 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	ITGB1	P05556	798 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	ENPP1	P22413	925 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	IGBP1	P78318	339 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	MGAT5	Q09328	741 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	VPS72	Q15906	364 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	RNF219	Q5W0B1	726 aa	Predicted RBP	4.62	□□□□□ -1.67
RDX-215	ENST00000533961	PGM2L1	Q6PCE3	622 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.62	□□□□□ -1.67
RDX-215	ENST00000533961	FBXO18	Q8NFZ0	1043 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	OR52N2	Q8NGI0	321 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	LMBR1	Q8WVP7	490 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	ORAI2	Q96SN7	254 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.62	□□□□□ -1.67
RDX-215	ENST00000533961	MLST8	Q9BVC4	326 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	SLC46A2	Q9BY10	475 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	SYNPO2L	Q9H987	977 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	HOMER2	Q9NSB8	354 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	DDX56	Q9NY93	547 aa	Known RBP	4.62	□□□□□ -1.67
RDX-215	ENST00000533961	EVL	Q9UI08	416 aa	Predicted RBP	4.62	□□□□□ -1.67
RDX-215	ENST00000533961	TNKS	O95271	1327 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	RPTOR	Q8N122	1335 aa		4.62	□□□□□ -1.67
RDX-215	ENST00000533961	GRID2IP	A4D2P6	1211 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PRR5-ARHGAP8	B1AHC4	643 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PJA2	O43164	708 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	PCDHGA12	O60330	932 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	IBSP	P21815	317 aa	Predicted RBP	4.61	□□□□□ -1.67
RDX-215	ENST00000533961	APBA1	Q02410	837 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	ODF1	Q14990	250 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	ACAP2	Q15057	778 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	UBE3C	Q15386	1083 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
RDX-215	ENST00000533961	HECTD2	Q5U5R9	776 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	C1QL3	Q5VWW1	255 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	KCNV1	Q6PIU1	500 aa		4.61	□□□□□ -1.67
RDX-215	ENST00000533961	RD3	Q7Z3Z2	195 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms