RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 FNBP1Q96RU3 617 aa30.69■■■□□ 2.5
SAMD1-202ENST00000533683 PCDHB18PQ96TA0 734 aa30.69■■■□□ 2.5
SAMD1-202ENST00000533683 ANKFY1Q9P2R3 1169 aa30.69■■■□□ 2.5
SAMD1-202ENST00000533683 SUCLA2Q9P2R7 463 aaPredicted RBP30.69■■■□□ 2.5
SAMD1-202ENST00000533683 A0A0B4J269 797 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 ZBTB42B2RXF5 422 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 BUB1BO60566 1050 aaPredicted RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 FTLP02792 175 aaPredicted RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 MRPS25P82663 173 aaKnown RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 TAF3Q5VWG9 929 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 CCNI2Q6ZMN8 369 aaPredicted RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 PLPPR4Q7Z2D5 763 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 PDE11AQ9HCR9 933 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 PNMA3Q9UL41 463 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 RNASE9P60153 205 aaKnown RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 ZBTB41Q5SVQ8 909 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 PNMA8AQ86V59 439 aaPredicted RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 ATP8B4Q8TF62 1192 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 PBKQ96KB5 322 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 HINFPQ9BQA5 517 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 MSTO1Q9BUK6 570 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 ZNF408Q9H9D4 720 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 PDGFCQ9NRA1 345 aa30.68■■■□□ 2.5
SAMD1-202ENST00000533683 ZC3H4Q9UPT8 1303 aaKnown RBP30.68■■■□□ 2.5
SAMD1-202ENST00000533683 POTEJP0CG39 1038 aa30.67■■■□□ 2.5
SAMD1-202ENST00000533683 TXNP10599 105 aaKnown RBP30.67■■■□□ 2.5
SAMD1-202ENST00000533683 TNNI1P19237 187 aa30.67■■■□□ 2.5
SAMD1-202ENST00000533683 MKRN4PQ13434 485 aaPredicted RBP30.67■■■□□ 2.5
SAMD1-202ENST00000533683 CASP8Q14790 479 aa30.67■■■□□ 2.5
SAMD1-202ENST00000533683 MYBL2P10244 700 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 SMC1AQ14683 1233 aaKnown RBP30.66■■■□□ 2.5
SAMD1-202ENST00000533683 ZACNQ401N2 412 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 MAP9Q49MG5 647 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 IER5Q5VY09 327 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 DHX38Q92620 1227 aaKnown RBP30.66■■■□□ 2.5
SAMD1-202ENST00000533683 CLEC11AQ9Y240 323 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 ADGRA2Q96PE1 1338 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 ZC3H11AO75152 810 aaKnown RBP eCLIP30.66■■■□□ 2.5
SAMD1-202ENST00000533683 LDHAP00338 332 aaKnown RBP30.66■■■□□ 2.5
SAMD1-202ENST00000533683 CYP11B1P15538 503 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 SLC7A5Q01650 507 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 GCNT1Q02742 428 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 PLCB4Q15147 1175 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 METTL13Q8N6R0 699 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 USP38Q8NB14 1042 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 RBAKQ9NYW8 714 aaPredicted RBP30.66■■■□□ 2.5
SAMD1-202ENST00000533683 COG5Q9UP83 839 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 PTPRJQ12913 1337 aa30.66■■■□□ 2.5
SAMD1-202ENST00000533683 LOC102724159A0A0B4J2E5 919 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 C4BPAP04003 597 aaKnown RBP30.65■■■□□ 2.5
SAMD1-202ENST00000533683 PWP2Q15269 919 aaKnown RBP30.65■■■□□ 2.5
SAMD1-202ENST00000533683 GPRC5AQ8NFJ5 357 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 RUBCNQ92622 972 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 HES6Q96HZ4 224 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 TTLL13PA6NNM8 815 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 RTN2O75298 545 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 MMEP08473 750 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 FMO1Q01740 532 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 GPR162Q16538 588 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 TDRD10Q5VZ19 366 aaKnown RBP30.65■■■□□ 2.5
SAMD1-202ENST00000533683 MAP1SQ66K74 1059 aaPredicted RBP30.65■■■□□ 2.5
SAMD1-202ENST00000533683 C8orf74Q6P047 294 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 AMFRQ9UKV5 643 aa30.65■■■□□ 2.5
SAMD1-202ENST00000533683 IGKV6-21A0A0C4DH24 114 aa30.64■■■□□ 2.5
SAMD1-202ENST00000533683 ASB14A6NK59 587 aa30.64■■■□□ 2.5
SAMD1-202ENST00000533683 GZMAP12544 262 aa30.64■■■□□ 2.5
SAMD1-202ENST00000533683 LAMTOR4Q0VGL1 99 aa30.64■■■□□ 2.5
SAMD1-202ENST00000533683 GSPT2Q8IYD1 628 aaKnown RBP30.64■■■□□ 2.5
SAMD1-202ENST00000533683 LRRC71Q8N4P6 559 aa30.64■■■□□ 2.5
SAMD1-202ENST00000533683 CEP104O60308 925 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 EFNA5P52803 228 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 TTLL4Q14679 1199 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 GLE1Q53GS7 698 aaKnown RBP30.64■■■□□ 2.49
SAMD1-202ENST00000533683 ARMCX2Q7L311 632 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 ENOSF1Q7L5Y1 443 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 RHOT2Q8IXI1 618 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 MSL3Q8N5Y2 521 aaKnown RBP30.64■■■□□ 2.49
SAMD1-202ENST00000533683 ACTRT1Q8TDG2 376 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 GTF3C2Q8WUA4 911 aaPredicted RBP30.64■■■□□ 2.49
SAMD1-202ENST00000533683 TCP11Q8WWU5 503 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 SELENOOQ9BVL4 669 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 PRDM10Q9NQV6 1147 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 C1orf112Q9NSG2 853 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 STIM2Q9P246 746 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 TMEM59LQ9UK28 342 aa30.64■■■□□ 2.49
SAMD1-202ENST00000533683 PDHXO00330 501 aa30.63■■■□□ 2.49
SAMD1-202ENST00000533683 GAS2O43903 313 aaKnown RBP30.63■■■□□ 2.49
SAMD1-202ENST00000533683 MSCO60682 206 aa30.63■■■□□ 2.49
SAMD1-202ENST00000533683 HLA-DRAP01903 254 aa30.63■■■□□ 2.49
SAMD1-202ENST00000533683 ZPBP2Q6X784 338 aa30.63■■■□□ 2.49
SAMD1-202ENST00000533683 MS4A4AQ96JQ5 239 aa30.63■■■□□ 2.49
SAMD1-202ENST00000533683 CCDC113Q9H0I3 377 aa30.63■■■□□ 2.49
SAMD1-202ENST00000533683 SRGAP2CP0DJJ0 459 aa30.62■■■□□ 2.49
SAMD1-202ENST00000533683 PDE6CP51160 858 aa30.62■■■□□ 2.49
SAMD1-202ENST00000533683 GPC5P78333 572 aa30.62■■■□□ 2.49
SAMD1-202ENST00000533683 CDCA2Q69YH5 1023 aaPredicted RBP30.62■■■□□ 2.49
SAMD1-202ENST00000533683 SCFD2Q8WU76 684 aa30.62■■■□□ 2.49
SAMD1-202ENST00000533683 HADHBP55084 474 aaKnown RBP30.62■■■□□ 2.49
SAMD1-202ENST00000533683 CDR2Q01850 454 aa30.62■■■□□ 2.49
SAMD1-202ENST00000533683 MXD4Q14582 209 aaPredicted RBP30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms