RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 PRR23CQ6ZRP0 262 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 DAGLBQ8NCG7 672 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 TNFRSF25Q93038 417 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 INO80BQ9C086 356 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 TBC1D22BQ9NU19 505 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 PCDHA10Q9Y5I2 948 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 FAM208BQ5VWN6 2430 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 NRP1O14786 923 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 DHX15O43143 795 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 PRPF40AO75400 957 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 DDHD2O94830 711 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 SPATA31D3P0C874 917 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 CD72P21854 359 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 GNA11P29992 359 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 LPAL2Q16609 132 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 ZNF852Q6ZMS4 543 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 SPATA31D4Q6ZUB0 917 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 ST13P5Q8NFI4 369 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 USP28Q96RU2 1077 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 GABBR1Q9UBS5 961 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 CFAP45Q9UL16 551 aa12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 PIN4Q9Y237 131 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-213ENST00000533149 MEIS3P2A8K0S8 358 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 M0R2N6 131 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 TGM5O43548 720 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 B4GALT3O60512 393 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 CSDE1O75534 798 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 SREBF1P36956 1147 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 ADCY7P51828 1080 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 DSG1Q02413 1049 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 ADCY1Q08828 1119 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 MTAPQ13126 283 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 PRR23BQ6ZRT6 265 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 PALB2Q86YC2 1186 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 BICD2Q8TD16 824 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 COL26A1Q96A83 441 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 ANO3Q9BYT9 981 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 SCAND2PQ9GZW5 306 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 RIC8AQ9NPQ8 531 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 RCOR1Q9UKL0 485 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 CLIC4Q9Y696 253 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 CNTNAP2Q9UHC6 1331 aa12.57□□□□□ -0.4
TRAPPC4-213ENST00000533149 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 DDX11L8A8MPP1 907 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 ZMYND10O75800 440 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 OATP04181 439 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 ATP2B1P20020 1258 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 DNM2P50570 870 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 LIMK1P53667 647 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 CREMQ03060 361 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 TAS1R1Q7RTX1 841 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 PGBD1Q96JS3 809 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 ZNF577Q9BSK1 485 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 GLT8D2Q9H1C3 349 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
TRAPPC4-213ENST00000533149 MYH15Q9Y2K3 1946 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 FAM86B1E9PN63 330 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 NR1I2O75469 434 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 FAM86B2P0C5J1 330 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 TDGF1P13385 188 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 SIM2Q14190 667 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 NBR1Q14596 966 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 RILPL1Q5EBL4 403 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 JAKMIP3Q5VZ66 844 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 AGMOQ6ZNB7 445 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 CATSPER4Q7RTX7 472 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 KRT25Q7Z3Z0 450 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 GRASPQ7Z6J2 395 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 ZNF410Q86VK4 478 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 RNF168Q8IYW5 571 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 FGF13Q92913 245 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 CHST7Q9NS84 486 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 MARCH5Q9NX47 278 aa12.55□□□□□ -0.4
TRAPPC4-213ENST00000533149 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms