RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FOXO4P98177 505 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ATP8B2P98198 1209 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TLE1Q04724 770 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 SMAD4Q13485 552 aaKnown RBP3.71□□□□□ -1.82
CD44-234ENST00000531873 PLS1Q14651 629 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 UBE3CQ15386 1083 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TUBB8Q3ZCM7 444 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 THEMIS2Q5TEJ8 643 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TRIM68Q6AZZ1 485 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 C1orf228Q6PIY5 440 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 CLEC14AQ86T13 490 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 OR2C3Q8N628 320 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 CELF5Q8N6W0 485 aaKnown RBP3.71□□□□□ -1.82
CD44-234ENST00000531873 ENAHQ8N8S7 591 aaPredicted RBP3.71□□□□□ -1.82
CD44-234ENST00000531873 KYQ8NBH2 561 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 IL31RAQ8NI17 732 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 DEPTORQ8TB45 409 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 MZB1Q8WU39 189 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ZNF480Q8WV37 535 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ANKS1AQ92625 1134 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 PHKBQ93100 1093 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 SLC35A4Q96G79 324 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 CCDC138Q96M89 665 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 RIPOR3Q96MK2 946 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 WRNIP1Q96S55 665 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 NUP62CLQ9H1M0 184 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 ARMT1Q9H993 441 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 PCDH18Q9HCL0 1135 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 GCM1Q9NP62 436 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TLR9Q9NR96 1032 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 LMBRD1Q9NUN5 540 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TDP1Q9NUW8 608 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 TRPS1Q9UHF7 1281 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 FBXO10Q9UK96 956 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 CORO2BQ9UQ03 480 aa3.71□□□□□ -1.82
CD44-234ENST00000531873 CCDC189A1A4V9 331 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 NT5C1B-RDH14C9J2C7 533 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 ETV2O00321 342 aaPredicted RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 KPNA5O15131 536 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PHGDHO43175 533 aaKnown RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 NCK2O43639 380 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 NUAK1O60285 661 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PIP5K1CO60331 668 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 MGEA5O60502 916 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PHF2O75151 1096 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PPFIA4O75335 1185 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 FSBPO95073 299 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 TYRP14679 529 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 NPR1P16066 1061 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 TSHRP16473 764 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 ZNF28P17035 718 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PFKLP17858 780 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 POLD1P28340 1107 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PCSK1P29120 753 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 GUCY1A2P33402 732 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 IL6STP40189 918 aaPredicted RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 KCNQ1P51787 676 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 GPSM2P81274 684 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 CHAF1AQ13111 956 aaPredicted RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 IFIT5Q13325 482 aaKnown RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 FGL2Q14314 439 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 MAN2A1Q16706 1144 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 TMEM95Q3KNT9 176 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 KHDC1Q4VXA5 237 aaKnown RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 C19orf54Q5BKX5 351 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 GJC2Q5T442 439 aaPredicted RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 LARP4Q71RC2 724 aaKnown RBP eCLIP3.7□□□□□ -1.82
CD44-234ENST00000531873 TAS1R1Q7RTX1 841 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 GPR155Q7Z3F1 870 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 HEATR3Q7Z4Q2 680 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 GGNQ86UU5 652 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 TTLL6Q8N841 843 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 DCBLD1Q8N8Z6 715 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 C3orf20Q8ND61 904 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 OR7D4Q8NG98 312 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 POF1BQ8WVV4 589 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 ZBTB8AQ96BR9 441 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 APIPQ96GX9 242 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 CLPTM1LQ96KA5 538 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 DIRC2Q96SL1 478 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 VRK1Q99986 396 aaPredicted RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 C14orf93Q9H972 538 aaKnown RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 BCO1Q9HAY6 547 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 TRMT13Q9NUP7 481 aaKnown RBP3.7□□□□□ -1.82
CD44-234ENST00000531873 SIRT5Q9NXA8 310 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 ABCF2Q9UG63 623 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 PCDHA3Q9Y5H8 950 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 USP19O94966 1318 aa3.7□□□□□ -1.82
CD44-234ENST00000531873 TEX51A0A1B0GUA7 166 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 RHPN2P1A8MT19 583 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 NBNO60934 754 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 HMGCRP04035 888 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 RPLP2P05387 115 aaKnown RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 MALP21145 153 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 FPR1P21462 350 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 TNFSF4P23510 183 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 PAX3P23760 479 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 DLX2Q07687 328 aaPredicted RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 SNAPC2Q13487 334 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 MTM1Q13496 603 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms