RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 B3GALT6Q96L58 329 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 IFT74Q96LB3 600 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 ADPGKQ9BRR6 497 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 RHOBTB2Q9BYZ6 727 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 RAB34Q9BZG1 259 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 BHMT2Q9H2M3 363 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 SMOC2Q9H3U7 446 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 SNTG2Q9NY99 539 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 FNIP2Q9P278 1114 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 KIAA1024Q9UPX6 916 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 STK24Q9Y6E0 443 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 SF3B1O75533 1304 aaKnown RBP eCLIP18.56■□□□□ 0.569e-7■■■■■ 57.4
CPSF1-207ENST00000531727 CCDC195A0A1B0GUA6 201 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 PTGESO14684 152 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 RECQL4O94761 1208 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 EDN1P05305 212 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 LIG1P18858 919 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 AVPR2P30518 371 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 PTGDRQ13258 359 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 TUSC3Q13454 348 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 KIFAP3Q92845 792 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 PAAF1Q9BRP4 392 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 KIFC3Q9BVG8 833 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 DDX19AQ9NUU7 478 aaKnown RBP18.56■□□□□ 0.56
CPSF1-207ENST00000531727 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 DAXXQ9UER7 740 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-207ENST00000531727 USP20Q9Y2K6 914 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 PCDHB6Q9Y5E3 794 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 MYO10Q9HD67 2058 aa18.56■□□□□ 0.56
CPSF1-207ENST00000531727 MTCL1Q9Y4B5 1905 aaKnown RBP18.55■□□□□ 0.56
CPSF1-207ENST00000531727 PAPLNO95428 1278 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 THP07101 528 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
CPSF1-207ENST00000531727 EFNA5P52803 228 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 CREMQ03060 361 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 TCF15Q12870 199 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 EEF1DP3Q658K8 133 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 PALB2Q86YC2 1186 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 SNX29Q8TEQ0 813 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 RIN2Q8WYP3 895 aaPredicted RBP18.55■□□□□ 0.56
CPSF1-207ENST00000531727 PLEKHA4Q9H4M7 779 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 POLD4Q9HCU8 107 aa18.55■□□□□ 0.56
CPSF1-207ENST00000531727 CASTOR2A6NHX0 329 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 LAD1O00515 517 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 RFPL2O75678 378 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 SPATA31D3P0C874 917 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 MYBP10242 640 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 NAB2Q15742 525 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 DCAF4L1Q3SXM0 396 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 SPATA31D4Q6ZUB0 917 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 CXCL16Q9H2A7 254 aa18.54■□□□□ 0.56
CPSF1-207ENST00000531727 WDR6Q9NNW5 1121 aaKnown RBP18.54■□□□□ 0.56
CPSF1-207ENST00000531727 CLUHO75153 1309 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 TGM5O43548 720 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 KIF4AO95239 1232 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 PRPHP41219 470 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 NUBP1P53384 320 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 RABEP1Q15276 862 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 RTP2Q5QGT7 225 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 LILRA6Q6PI73 481 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 GLYCTKQ8IVS8 523 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 HASPINQ8TF76 798 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 SMG7Q92540 1137 aaKnown RBP18.53■□□□□ 0.56
CPSF1-207ENST00000531727 ZNF707Q96C28 371 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-207ENST00000531727 ZDHHC7Q9NXF8 308 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 DNM3Q9UQ16 869 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 GDAQ9Y2T3 454 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 KIF3AQ9Y496 699 aa18.53■□□□□ 0.56
CPSF1-207ENST00000531727 PP2D1A8MPX8 630 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 E9PMD0 336 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 K7ERI5 159 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 N4BP1O75113 896 aaKnown RBP18.52■□□□□ 0.56
CPSF1-207ENST00000531727 RPL17P18621 184 aaKnown RBP18.52■□□□□ 0.56
CPSF1-207ENST00000531727 TDGQ13569 410 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 IL17AQ16552 155 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 ATF7IP2Q5U623 682 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 FAM171A1Q5VUB5 890 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 KRT79Q5XKE5 535 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 PRSS55Q6UWB4 352 aaPredicted RBP18.52■□□□□ 0.56
CPSF1-207ENST00000531727 APBB1IPQ7Z5R6 666 aaPredicted RBP18.52■□□□□ 0.56
CPSF1-207ENST00000531727 PIK3R5Q8WYR1 880 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 STAMQ92783 540 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 TTPALQ9BTX7 342 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 NT5C3AQ9H0P0 336 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 KCNK12Q9HB15 430 aa18.52■□□□□ 0.56
CPSF1-207ENST00000531727 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.52■□□□□ 0.56
CPSF1-207ENST00000531727 PHLPP2Q6ZVD8 1323 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 ST18O60284 1047 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 GBP2P32456 591 aaPredicted RBP18.51■□□□□ 0.55
CPSF1-207ENST00000531727 PEX3P56589 373 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 ELAVL2Q12926 359 aaKnown RBP18.51■□□□□ 0.55
CPSF1-207ENST00000531727 DTHD1Q6ZMT9 781 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 DAW1Q8N136 415 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 PHOX2BQ99453 314 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 PIDD1Q9HB75 910 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 IGSF9Q9P2J2 1179 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 TNFSF13BQ9Y275 285 aa18.51■□□□□ 0.55
CPSF1-207ENST00000531727 CCDC169A6NNP5 214 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 CDC25AP30304 524 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms