RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 ATP6V1DQ9Y5K8 247 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 KIAA1671Q9BY89 1806 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 POLR2DO15514 142 aaKnown RBP15.85■□□□□ 0.13
FOXR1-202ENST00000531539 LINC01565O15544 149 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 TOM1L1O75674 476 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 THP07101 528 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 GRM5P41594 1212 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 KCNQ1P51787 676 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 YARSP54577 528 aaKnown RBP15.85■□□□□ 0.13
FOXR1-202ENST00000531539 ADAM15Q13444 863 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 ZC2HC1CQ53FD0 456 aaPredicted RBP15.85■□□□□ 0.13
FOXR1-202ENST00000531539 HERC4Q5GLZ8 1057 aaPredicted RBP15.85■□□□□ 0.13
FOXR1-202ENST00000531539 TJAP1Q5JTD0 557 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 SFR1Q86XK3 245 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 CEP120Q8N960 986 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 LEO1Q8WVC0 666 aaPredicted RBP15.85■□□□□ 0.13
FOXR1-202ENST00000531539 PABPC5Q96DU9 382 aaKnown RBP15.85■□□□□ 0.13
FOXR1-202ENST00000531539 ACAP3Q96P50 834 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 LRRC27Q9C0I9 530 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 ANKFY1Q9P2R3 1169 aa15.85■□□□□ 0.13
FOXR1-202ENST00000531539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
FOXR1-202ENST00000531539 HIDE1A8MVS5 230 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 H3BQ06 376 aaPredicted RBP15.84■□□□□ 0.13
FOXR1-202ENST00000531539 CLDN3O15551 220 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 GAP43P17677 238 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 PROZP22891 400 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 LIG4P49917 911 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 GTF2BQ00403 316 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 AMPD3Q01432 767 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 DSC1Q08554 894 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 GRIK3Q13003 919 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
FOXR1-202ENST00000531539 E2F4Q16254 413 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 SEZ6Q53EL9 994 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 RESP18Q5W5W9 173 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 ZPBP2Q6X784 338 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 ZNF720Q7Z2F6 126 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 MRPL43Q8N983 215 aaKnown RBP15.84■□□□□ 0.13
FOXR1-202ENST00000531539 TMEM87AQ8NBN3 555 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 AUTS2Q8WXX7 1259 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 FIZ1Q96SL8 496 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 MRPL44Q9H9J2 332 aaKnown RBP15.84■□□□□ 0.13
FOXR1-202ENST00000531539 PANK4Q9NVE7 773 aa15.84■□□□□ 0.13
FOXR1-202ENST00000531539 F8W810 466 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 ABLIM1O14639 778 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 PTGESO14684 152 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 TADA2AO75478 443 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 BMP1P13497 986 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 SCP2P22307 547 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 TUSC3Q13454 348 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 TAS1R1Q7RTX1 841 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 EFHBQ8N7U6 833 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 VN1R3Q9BXE9 311 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 CUEDC2Q9H467 287 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 TOPORSQ9NS56 1045 aaPredicted RBP15.83■□□□□ 0.12
FOXR1-202ENST00000531539 CACNG4Q9UBN1 327 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 MYH11P35749 1972 aa15.83■□□□□ 0.12
FOXR1-202ENST00000531539 PLXNA4Q9HCM2 1894 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 SMIM28A0A1B0GU29 152 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 C2orf71A6NGG8 1288 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 CASTOR2A6NHX0 329 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 DLL1O00548 723 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 HNRNPDLO14979 420 aaKnown RBP15.82■□□□□ 0.12
FOXR1-202ENST00000531539 LTBRP36941 435 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 NUCB2P80303 420 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 DLX2Q07687 328 aaPredicted RBP15.82■□□□□ 0.12
FOXR1-202ENST00000531539 MCL1Q07820 350 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 NOLC1Q14978 699 aaKnown RBP eCLIP15.82■□□□□ 0.12
FOXR1-202ENST00000531539 CLUL1Q15846 466 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 DUSP6Q16828 381 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 CTC1Q2NKJ3 1217 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 LEXMQ3ZCV2 418 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 GLRA4Q5JXX5 417 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 ADALQ6DHV7 355 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 CCDC65Q8IXS2 484 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.82■□□□□ 0.12
FOXR1-202ENST00000531539 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 SCAND2PQ9GZW5 306 aaPredicted RBP15.82■□□□□ 0.12
FOXR1-202ENST00000531539 ZBP1Q9H171 429 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 KBTBD4Q9NVX7 518 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
FOXR1-202ENST00000531539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.81■□□□□ 0.12
FOXR1-202ENST00000531539 A0A1B0GVL5 298 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 ANKRD63C9JTQ0 380 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 CTSAP10619 480 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 CMA1P23946 247 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 ABCD1P33897 745 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 AFMP43652 599 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 NDUFV1P49821 464 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 RBM10P98175 930 aaKnown RBP15.81■□□□□ 0.12
FOXR1-202ENST00000531539 COL19A1Q14993 1142 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 ALKAL1Q6UXT8 129 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 PRUNE2Q8WUY3 3088 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 KCNN1Q92952 543 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 CDCA3Q99618 268 aaPredicted RBP15.81■□□□□ 0.12
FOXR1-202ENST00000531539 PAAF1Q9BRP4 392 aa15.81■□□□□ 0.12
FOXR1-202ENST00000531539 COL25A1Q9BXS0 654 aaPredicted RBP15.81■□□□□ 0.12
FOXR1-202ENST00000531539 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms