RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LRRC43Q8N309 656 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 FIBCD1Q8N539 461 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 RNF169Q8NCN4 708 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 GPT2Q8TD30 523 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 CCDC47Q96A33 483 aaKnown RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 SAMD11Q96NU1 681 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 GBP3Q9H0R5 595 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 ZNF576Q9H609 170 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 SLC28A3Q9HAS3 691 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 TBC1D13Q9NVG8 400 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 RMND1Q9NWS8 449 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 SNTG2Q9NY99 539 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 CGNQ9P2M7 1197 aaKnown RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 KANSL3Q9P2N6 904 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 ANKFY1Q9P2R3 1169 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 MRPL42Q9Y6G3 142 aaKnown RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 AKAP5P24588 427 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 DSC1Q08554 894 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 NAB2Q15742 525 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 KNOP1Q1ED39 458 aaKnown RBP15.8■□□□□ 0.12
CPSF1-206ENST00000531480 PPP2R2DQ66LE6 453 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 ZBTB33Q86T24 672 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 TMEM192Q8IY95 271 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 ABI1Q8IZP0 508 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
CPSF1-206ENST00000531480 SMARCE1Q969G3 411 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 TGS1Q96RS0 853 aaKnown RBP15.8■□□□□ 0.12
CPSF1-206ENST00000531480 GAD1Q99259 594 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 TCHPQ9BT92 498 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 KCTD10Q9H3F6 313 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 CLSTN2Q9H4D0 955 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 TYW1Q9NV66 732 aaKnown RBP15.8■□□□□ 0.12
CPSF1-206ENST00000531480 MIOSQ9NXC5 875 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 CPSF3Q9UKF6 684 aaKnown RBP15.8■□□□□ 0.12
CPSF1-206ENST00000531480 STXBP5LQ9Y2K9 1186 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 RWDD3Q9Y3V2 267 aa15.8■□□□□ 0.12
CPSF1-206ENST00000531480 PTGESO14684 152 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 KIAA0391O15091 583 aaKnown RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 CLTAP09496 248 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 MCM4P33991 863 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 BMPR1AP36894 532 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 MLH1P40692 756 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 SLC10A6Q3KNW5 377 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 CRELD2Q6UXH1 353 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 SPRED2Q7Z698 418 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 ERCC4Q92889 916 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 SNX27Q96L92 541 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 FBXL18Q96ME1 805 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 ZFP42Q96MM3 310 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 ACAP3Q96P50 834 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 MSTO1Q9BUK6 570 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 CCDC94Q9BW85 323 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 PLVAPQ9BX97 442 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 SEMA6BQ9H3T3 888 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 PLEKHA5Q9HAU0 1116 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 AGPAT3Q9NRZ7 376 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 TOPORSQ9NS56 1045 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 CNTN3Q9P232 1028 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 KIAA1468Q9P260 1216 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 GDAQ9Y2T3 454 aa15.79■□□□□ 0.12
CPSF1-206ENST00000531480 COL4A4P53420 1690 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-206ENST00000531480 TTC26A0AVF1 554 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 CARNS1A5YM72 827 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 PDXKO00764 312 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 B4GALT3O60512 393 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 KIF20AO95235 890 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 RB1P06400 928 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 KCNE1P15382 129 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 BMP6P22004 513 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 GRIK3Q13003 919 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 MORC3Q14149 939 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 NFIL3Q16649 462 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 PAN2Q504Q3 1202 aaKnown RBP15.78■□□□□ 0.12
CPSF1-206ENST00000531480 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 SLC9A9Q8IVB4 645 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 THNSL1Q8IYQ7 743 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 SYCP3Q8IZU3 236 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 URGCPQ8TCY9 931 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 POMGNT1Q8WZA1 660 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 P2RX5Q93086 422 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 PPP1R10Q96QC0 940 aaKnown RBP15.78■□□□□ 0.12
CPSF1-206ENST00000531480 TSPAN18Q96SJ8 248 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 CBWD1Q9BRT8 395 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 C17orf80Q9BSJ5 609 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 CXCL16Q9H2A7 254 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 NRDE2Q9H7Z3 1164 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 HCSTQ9UBK5 93 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 PARP2Q9UGN5 583 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 MAN1B1Q9UKM7 699 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 AGO2Q9UKV8 859 aaKnown RBP15.78■□□□□ 0.12
CPSF1-206ENST00000531480 PLAGL2Q9UPG8 496 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 TRAF3IP3Q9Y228 551 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 PLXNA4Q9HCM2 1894 aa15.78■□□□□ 0.12
CPSF1-206ENST00000531480 MYO9BQ13459 2157 aa15.77■□□□□ 0.12
CPSF1-206ENST00000531480 ATG2AQ2TAZ0 1938 aa15.77■□□□□ 0.12
CPSF1-206ENST00000531480 DDHD2O94830 711 aa15.77■□□□□ 0.12
CPSF1-206ENST00000531480 MBD3O95983 291 aa15.77■□□□□ 0.12
CPSF1-206ENST00000531480 LDHAP00338 332 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms