RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 AKAP5P24588 427 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 IGFBP6P24592 240 aaPredicted RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 NTHL1P78549 312 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 CYP4A11Q02928 519 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 CTTNQ14247 550 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 FUT10Q6P4F1 479 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 ZC3H14Q6PJT7 736 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 POTEHQ6S545 545 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 PRSS55Q6UWB4 352 aaPredicted RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 CYP26C1Q6V0L0 522 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 RUFY3Q7L099 469 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 KRT25Q7Z3Z0 450 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 FAM20AQ96MK3 541 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 APOL6Q9BWW8 343 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 C22orf23Q9BZE7 217 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 CSRNP2Q9H175 543 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 SLC2A4RGQ9NR83 387 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 ANK1P16157 1881 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 KIF26AQ9ULI4 1882 aaPredicted RBP10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 A0A087WWV3 80 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 ADAM12O43184 909 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 ZMYND10O75800 440 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 ERLIN2O94905 339 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 SLITRK3O94933 977 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 GLRA2P23416 452 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 GPC5P78333 572 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 STK3Q13188 491 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 EPHA7Q15375 998 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 NAB2Q15742 525 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 XKR9Q5GH70 373 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 NCAPH2Q6IBW4 605 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 PHLDB3Q6NSJ2 640 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 PARM1Q6UWI2 310 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 NEK8Q86SG6 692 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 SUMF1Q8NBK3 374 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 CNNM3Q8NE01 707 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 PJA1Q8NG27 643 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 HDAC7Q8WUI4 952 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 STAMQ92783 540 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 MTRQ99707 1265 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 UBN1Q9NPG3 1134 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 ZDHHC7Q9NXF8 308 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 KLK14Q9P0G3 267 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 FNIP2Q9P278 1114 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 FBXW11Q9UKB1 542 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 ADAM28Q9UKQ2 775 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 MTF2Q9Y483 593 aaPredicted RBP10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 PPME1Q9Y570 386 aa10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 FASNP49327 2511 aaKnown RBP10.23□□□□□ -0.77
CHMP4A-205ENST00000531158 SHISA7A6NL88 538 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 PRR5-ARHGAP8B1AHC4 643 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 INO80B-WBP1J3KQ70 363 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 STK25O00506 426 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 PTGESO14684 152 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 GAS2O43903 313 aaKnown RBP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 CCNT1O60563 726 aaKnown RBP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 KIF4AO95239 1232 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 CTDNEP1O95476 244 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 C1RP00736 705 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 EDN1P05305 212 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 ARL2P36404 184 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 STARD6P59095 220 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 ARHGAP8P85298 464 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 SCRN1Q12765 414 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 GALNT17Q6IS24 598 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 NOTUMQ6P988 496 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 DCLRE1AQ6PJP8 1040 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 PIK3AP1Q6ZUJ8 805 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 GRASPQ7Z6J2 395 aaPredicted RBP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 C1orf210Q8IVY1 113 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 ITFG1Q8TB96 612 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 HASPINQ8TF76 798 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 TCP11Q8WWU5 503 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 NXPE3Q969Y0 559 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 CCDC51Q96ER9 411 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 ZNF274Q96GC6 653 aaPredicted RBP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 HSD17B14Q9BPX1 270 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 CLSTN3Q9BQT9 956 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 RTKNQ9BST9 563 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 DDX23Q9BUQ8 820 aaKnown RBP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 SLKQ9H2G2 1235 aaPredicted RBP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 PLEKHA4Q9H4M7 779 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 NCDNQ9UBB6 729 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 SIT1Q9Y3P8 196 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 MYH11P35749 1972 aa10.22□□□□□ -0.77
CHMP4A-205ENST00000531158 A0A1B0GUA9 196 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 TBX3O15119 743 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 ASAP2O43150 1006 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 LYPLA2O95372 231 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 NPTXRO95502 500 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms