RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 EXOC3L4Q17RC7 722 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ARL13BQ3SXY8 428 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 TDRD12Q587J7 1177 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SLC45A4Q5BKX6 768 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 C1orf141Q5JVX7 400 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ANKRD40Q6AI12 368 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 RAPH1Q70E73 1250 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CLNKQ7Z7G1 428 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 C11orf74Q86VG3 221 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 OR6Y1Q8NGX8 325 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 WASF1Q92558 559 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SPOCK2Q92563 424 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ORAI2Q96SN7 254 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ROPN1BQ9BZX4 212 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ROPN1Q9HAT0 212 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CLK4Q9HAZ1 481 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ARL8BQ9NVJ2 186 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ZFP69BQ9UJL9 534 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 PHTF1Q9UMS5 762 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 TRAF3IP3Q9Y228 551 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 HEMK1Q9Y5R4 338 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ALS2Q96Q42 1657 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 A0A088AWK7 358 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 FAM47E-STBD1D6RA91 191 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 FUCA1P04066 466 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 UQCRBP14927 111 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 IFNAR1P17181 557 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 WDR4P57081 412 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 PTENP60484 403 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 DR1Q01658 176 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 DLG1Q12959 904 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 STRN3Q13033 797 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 PDK3Q15120 406 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CYTH1Q15438 398 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 PROSER3Q2NL68 480 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ANKDD1AQ495B1 522 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SFT2D3Q587I9 215 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 ELMSAN1Q6PJG2 1045 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 DHRS4L2Q6PKH6 230 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CAPN12Q6ZSI9 719 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 GIMAP8Q8ND71 665 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 TRPC4APQ8TEL6 797 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 PYROXD1Q8WU10 500 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 GLG1Q92896 1179 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SHISA4Q96DD7 197 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 MAK16Q9BXY0 300 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 FHDC1Q9C0D6 1143 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SLC7A5P2Q9GIP4 190 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SLCO1B3Q9NPD5 702 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 COPRSQ9NQ92 184 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 NDE1Q9NXR1 346 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 SCHIP1Q9P0W5 487 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
PTPRK-219ENST00000531050 MYH6P13533 1939 aa8.27□□□□□ -1.08
PTPRK-219ENST00000531050 A0A087X0T9 212 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 TTLL13PA6NNM8 815 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 BTNL10A8MVZ5 291 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 NDC80O14777 642 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 XPOTO43592 962 aaKnown RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 FBXO21O94952 628 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 GAS8O95995 478 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 FAM228BP0C875 321 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 VCLP18206 1134 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 RFX5P48382 616 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 DRG2P55039 364 aaKnown RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 RAB15P59190 212 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ASPHQ12797 758 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 DNAJC3Q13217 504 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 E2F2Q14209 437 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 SLC18A3Q16572 532 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF568Q3ZCX4 644 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 KIAA1755Q5JYT7 1200 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 IL23RQ5VWK5 629 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ANO5Q75V66 913 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 MTDHQ86UE4 582 aaKnown RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 RASSF3Q86WH2 238 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 PPP4R1Q8TF05 950 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 P2RX5Q93086 422 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 NEUROD6Q96NK8 337 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CRNKL1Q9BZJ0 848 aaKnown RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CEP44Q9C0F1 390 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 TMEM60Q9H2L4 133 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ARMC7Q9H6L4 198 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 PPM1HQ9ULR3 514 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 TTC7AQ9ULT0 858 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 SCN11AQ9UI33 1791 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 WNK3Q9BYP7 1800 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 C15orf38-AP3S2A0A0A6YYH1 394 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 F8W8V4 182 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 GYG2O15488 501 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms