RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CCDC137Q6PK04 289 aaKnown RBP15.06■□□□□ 0
PCF11-204ENST00000530660 ABCB11O95342 1321 aa15.06■□□□□ 0
PCF11-204ENST00000530660 IRS4O14654 1257 aaPredicted RBP15.06■□□□□ 0
PCF11-204ENST00000530660 PLSCR1O15162 318 aa15.06■□□□□ 0
PCF11-204ENST00000530660 ATP9BO43861 1147 aa15.06■□□□□ 0
PCF11-204ENST00000530660 GALCP54803 685 aa15.06■□□□□ 0
PCF11-204ENST00000530660 CTSWP56202 376 aa15.06■□□□□ 0
PCF11-204ENST00000530660 ZNF362Q5T0B9 420 aaPredicted RBP15.06■□□□□ 0
PCF11-204ENST00000530660 C10orf76Q5T2E6 689 aa15.06■□□□□ 0
PCF11-204ENST00000530660 BLIDQ8IZY5 108 aa15.06■□□□□ 0
PCF11-204ENST00000530660 SLC35G2Q8TBE7 412 aa15.06■□□□□ 0
PCF11-204ENST00000530660 RBM46Q8TBY0 533 aaKnown RBP15.06■□□□□ 0
PCF11-204ENST00000530660 PTTG2Q9NZH5 202 aa15.06■□□□□ 0
PCF11-204ENST00000530660 IGSF9BQ9UPX0 1349 aa15.06■□□□□ 0
PCF11-204ENST00000530660 ANPEPP15144 967 aa15.05■□□□□ 0
PCF11-204ENST00000530660 LRRC63Q05C16 580 aa15.05■□□□□ 0
PCF11-204ENST00000530660 CYLC2Q14093 348 aaPredicted RBP15.05■□□□□ 0
PCF11-204ENST00000530660 PUM3Q15397 648 aaKnown RBP15.05■□□□□ 0
PCF11-204ENST00000530660 PPP1R21Q6ZMI0 780 aa15.05■□□□□ 0
PCF11-204ENST00000530660 GUF1Q8N442 669 aaKnown RBP15.05■□□□□ 0
PCF11-204ENST00000530660 ART4Q93070 314 aa15.05■□□□□ 0
PCF11-204ENST00000530660 USP29Q9HBJ7 922 aa15.05■□□□□ 0
PCF11-204ENST00000530660 A0A1W2PRG0 241 aa15.05■□□□□ -0
PCF11-204ENST00000530660 TCRBV7S2A1N4TA0A589 114 aa15.05■□□□□ -0
PCF11-204ENST00000530660 RASA4BC9J798 803 aa15.05■□□□□ -0
PCF11-204ENST00000530660 RASA4O43374 803 aa15.05■□□□□ -0
PCF11-204ENST00000530660 EDF1O60869 148 aaKnown RBP15.05■□□□□ -0
PCF11-204ENST00000530660 FGFR1P11362 822 aa15.05■□□□□ -0
PCF11-204ENST00000530660 RGS2P41220 211 aa15.05■□□□□ -0
PCF11-204ENST00000530660 CCR3P51677 355 aa15.05■□□□□ -0
PCF11-204ENST00000530660 MTTPP55157 894 aa15.05■□□□□ -0
PCF11-204ENST00000530660 MAP3K10Q02779 954 aa15.05■□□□□ -0
PCF11-204ENST00000530660 LMNB2Q03252 620 aa15.05■□□□□ -0
PCF11-204ENST00000530660 EVX2Q03828 476 aa15.05■□□□□ -0
PCF11-204ENST00000530660 GRAMD4Q6IC98 578 aa15.05■□□□□ -0
PCF11-204ENST00000530660 CCDC105Q8IYK2 499 aa15.05■□□□□ -0
PCF11-204ENST00000530660 ADAM33Q9BZ11 813 aa15.05■□□□□ -0
PCF11-204ENST00000530660 TAS2R1Q9NYW7 299 aa15.05■□□□□ -0
PCF11-204ENST00000530660 TBC1D7Q9P0N9 293 aa15.05■□□□□ -0
PCF11-204ENST00000530660 CCDC194A0A1B0GVG4 234 aa15.05■□□□□ -0
PCF11-204ENST00000530660 LSM1O15116 133 aaKnown RBP15.05■□□□□ -0
PCF11-204ENST00000530660 PHF2O75151 1096 aa15.05■□□□□ -0
PCF11-204ENST00000530660 CHRNB2P17787 502 aa15.05■□□□□ -0
PCF11-204ENST00000530660 GTF2H1P32780 548 aa15.05■□□□□ -0
PCF11-204ENST00000530660 TECP42680 631 aa15.05■□□□□ -0
PCF11-204ENST00000530660 CPA2P48052 419 aa15.05■□□□□ -0
PCF11-204ENST00000530660 MARCKSL1P49006 195 aa15.05■□□□□ -0
PCF11-204ENST00000530660 ARFIP2P53365 341 aa15.05■□□□□ -0
PCF11-204ENST00000530660 OVGP1Q12889 678 aa15.05■□□□□ -0
PCF11-204ENST00000530660 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
PCF11-204ENST00000530660 RAPH1Q70E73 1250 aa15.05■□□□□ -0
PCF11-204ENST00000530660 PRPF31Q8WWY3 499 aaKnown RBP15.05■□□□□ -0
PCF11-204ENST00000530660 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
PCF11-204ENST00000530660 DGCR14Q96DF8 476 aaKnown RBP15.05■□□□□ -0
PCF11-204ENST00000530660 LRP2BPQ9P2M1 347 aa15.05■□□□□ -0
PCF11-204ENST00000530660 FAM47DPA6NHR8 397 aa15.04■□□□□ -0
PCF11-204ENST00000530660 PCSK6P29122 969 aa15.04■□□□□ -0
PCF11-204ENST00000530660 ZNF568Q3ZCX4 644 aa15.04■□□□□ -0
PCF11-204ENST00000530660 B3GNT6Q6ZMB0 384 aa15.04■□□□□ -0
PCF11-204ENST00000530660 NANOGNBQ7Z5D8 188 aa15.04■□□□□ -0
PCF11-204ENST00000530660 ATP11CQ8NB49 1132 aa15.04■□□□□ -0
PCF11-204ENST00000530660 CABLES1Q8TDN4 633 aa15.04■□□□□ -0
PCF11-204ENST00000530660 CTNNBL1Q8WYA6 563 aaPredicted RBP15.04■□□□□ -0
PCF11-204ENST00000530660 FAM161BQ96MY7 647 aa15.04■□□□□ -0
PCF11-204ENST00000530660 PARP2Q9UGN5 583 aa15.04■□□□□ -0
PCF11-204ENST00000530660 HTR3EA5X5Y0 456 aa15.04■□□□□ -0
PCF11-204ENST00000530660 TTLL1O95922 423 aa15.04■□□□□ -0
PCF11-204ENST00000530660 BCAMP50895 628 aa15.04■□□□□ -0
PCF11-204ENST00000530660 AMPD3Q01432 767 aa15.04■□□□□ -0
PCF11-204ENST00000530660 MAP7D1Q3KQU3 841 aa15.04■□□□□ -0
PCF11-204ENST00000530660 SLC45A4Q5BKX6 768 aa15.04■□□□□ -0
PCF11-204ENST00000530660 KLHDC10Q6PID8 442 aa15.04■□□□□ -0
PCF11-204ENST00000530660 CCDC174Q6PII3 467 aa15.04■□□□□ -0
PCF11-204ENST00000530660 TRMT10CQ7L0Y3 403 aaKnown RBP15.04■□□□□ -0
PCF11-204ENST00000530660 OTOAQ7RTW8 1153 aa15.04■□□□□ -0
PCF11-204ENST00000530660 RIN3Q8TB24 985 aa15.04■□□□□ -0
PCF11-204ENST00000530660 COL6A2P12110 1019 aa15.04■□□□□ -0
PCF11-204ENST00000530660 VCAM1P19320 739 aa15.04■□□□□ -0
PCF11-204ENST00000530660 FGFR2P21802 821 aa15.04■□□□□ -0
PCF11-204ENST00000530660 CYP7A1P22680 504 aa15.04■□□□□ -0
PCF11-204ENST00000530660 TRIM28Q13263 835 aaKnown RBP15.04■□□□□ -0
PCF11-204ENST00000530660 DCTN2Q13561 401 aaKnown RBP15.04■□□□□ -0
PCF11-204ENST00000530660 TMED2Q15363 201 aa15.04■□□□□ -0
PCF11-204ENST00000530660 PPP2R5EQ16537 467 aa15.04■□□□□ -0
PCF11-204ENST00000530660 PPP1R14BQ96C90 147 aa15.04■□□□□ -0
PCF11-204ENST00000530660 TSG101Q99816 390 aa15.04■□□□□ -0
PCF11-204ENST00000530660 STK33Q9BYT3 514 aa15.04■□□□□ -0
PCF11-204ENST00000530660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.04■□□□□ -06e-10■■■■■ 59.4
PCF11-204ENST00000530660 SAR1AQ9NR31 198 aa15.04■□□□□ -0
PCF11-204ENST00000530660 AJAP1Q9UKB5 411 aaPredicted RBP15.04■□□□□ -0
PCF11-204ENST00000530660 ANGPTL2Q9UKU9 493 aa15.04■□□□□ -0
PCF11-204ENST00000530660 PPM1HQ9ULR3 514 aa15.04■□□□□ -0
PCF11-204ENST00000530660 SMIM31A0A1B0GVY4 71 aa15.03■□□□□ -0
PCF11-204ENST00000530660 PODXLO00592 558 aa15.03■□□□□ -0
PCF11-204ENST00000530660 BCRP11274 1271 aa15.03■□□□□ -0
PCF11-204ENST00000530660 FKBP3Q00688 224 aaKnown RBP15.03■□□□□ -0
PCF11-204ENST00000530660 ACAD11Q709F0 780 aa15.03■□□□□ -0
PCF11-204ENST00000530660 SLC25A41Q8N5S1 370 aa15.03■□□□□ -0
PCF11-204ENST00000530660 CFAP61Q8NHU2 1237 aa15.03■□□□□ -0
PCF11-204ENST00000530660 KRT35Q92764 455 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms