RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 PSMD10O75832 226 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 POMCP01189 267 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 TDGF1P13385 188 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 HOXA6P31267 233 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 QARSP47897 775 aaKnown RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 DRP2Q13474 957 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 UGCGQ16739 394 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 PABPC1LQ4VXU2 614 aaKnown RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 B3GNT9Q6UX72 402 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 GRASPQ7Z6J2 395 aaPredicted RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 NPAS3Q8IXF0 933 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 LEMD2Q8NC56 503 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 IRF7Q92985 503 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 E2F7Q96AV8 911 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 GAD1Q99259 594 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 TTPALQ9BTX7 342 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 RNF26Q9BY78 433 aaPredicted RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 CSRNP2Q9H175 543 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 UNC45AQ9H3U1 944 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 DHX33Q9H6R0 707 aaKnown RBP6.25□□□□□ -1.41
CTSB-216ENST00000530290 PARD6AQ9NPB6 346 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 SH3GLB2Q9NR46 395 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 SEMA4GQ9NTN9 838 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 DACH1Q9UI36 760 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 IPPQ9Y573 584 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 TAF6LQ9Y6J9 622 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 PCNX2A6NKB5 2137 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 TICRRQ7Z2Z1 1910 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 COL4A2P08572 1712 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 SPEGQ15772 3267 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 CYP3A7-CYP3A51PA0A087WV96 503 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 CCDC163A0A0D9SF12 145 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 TMEM189-UBE2V1I3L0A0 370 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 ZNF197O14709 1029 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 LRRN2O75325 713 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 TADA2AO75478 443 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 CSDE1O75534 798 aaKnown RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 PROS1P07225 676 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 GCFC2P16383 781 aaKnown RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 CYP3A7P24462 503 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 HOXA11P31270 313 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 CXCL12P48061 93 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 SCNN1GP51170 649 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 SPIRE1Q08AE8 756 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 SPEM2Q0P670 501 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 LAMTOR4Q0VGL1 99 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 MTAPQ13126 283 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 PPP2R5CQ13362 524 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 TUSC3Q13454 348 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 COL9A3Q14050 684 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 RAB33AQ14088 237 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 SIM2Q14190 667 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 HSP90AA2PQ14568 343 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 PSMD5Q16401 504 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 UBXN11Q5T124 520 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 CREB3L3Q68CJ9 461 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 GALNT17Q6IS24 598 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 DHX32Q7L7V1 743 aaKnown RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 OTUD6AQ7L8S5 288 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 FERMT3Q86UX7 667 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 PALB2Q86YC2 1186 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 C4orf19Q8IY42 314 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 SPEM1Q8N4L4 309 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 C12orf50Q8NA57 414 aaPredicted RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 RNF149Q8NC42 400 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 SMG8Q8ND04 991 aaKnown RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 FEZF2Q8TBJ5 459 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 PRIMPOLQ96LW4 560 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 BRD9Q9H8M2 597 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 ZFP14Q9HCL3 533 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 MRPS23Q9Y3D9 190 aaKnown RBP6.24□□□□□ -1.41
CTSB-216ENST00000530290 PCDHGA5Q9Y5G8 931 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 CITO14578 2027 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 TRIP11Q15643 1979 aa6.24□□□□□ -1.41
CTSB-216ENST00000530290 WDFY3Q8IZQ1 3526 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 KLF18A0A0U1RQI7 1052 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 DDX11L8A8MPP1 907 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 TBX3O15119 743 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 PRPF3O43395 683 aaKnown RBP6.23□□□□□ -1.41
CTSB-216ENST00000530290 TRAPPC3O43617 180 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 TSPAN1O60635 241 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 AKAP3O75969 853 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 STBD1O95210 358 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 P4HBP07237 508 aaKnown RBP6.23□□□□□ -1.41
CTSB-216ENST00000530290 RBM25P49756 843 aaKnown RBP6.23□□□□□ -1.41
CTSB-216ENST00000530290 PTENP60484 403 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 EMC2Q15006 297 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 NECTIN1Q15223 517 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 TSGA10IPQ3SY00 556 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 LONRF3Q496Y0 759 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 AASDHQ4L235 1098 aaPredicted RBP6.23□□□□□ -1.41
CTSB-216ENST00000530290 DGKKQ5KSL6 1271 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 PPP4R3AQ6IN85 833 aa6.23□□□□□ -1.41
CTSB-216ENST00000530290 SLC27A1Q6PCB7 646 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms