RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SPTLC3Q9NUV7 552 aa15.66■□□□□ 0.1
TTC39A-216ENST00000530004 USP20Q9Y2K6 914 aa15.66■□□□□ 0.1
TTC39A-216ENST00000530004 MAPK13O15264 365 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 GARTP22102 1010 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 CLCN1P35523 988 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 KCNJ6P48051 423 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 ZBED6P86452 979 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 MBTPS1Q14703 1052 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 MAPK6Q16659 721 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 FBXO47Q5MNV8 452 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 ZNF397Q8NF99 534 aaPredicted RBP15.65■□□□□ 0.1
TTC39A-216ENST00000530004 OSBPL7Q9BZF2 842 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 FZD8Q9H461 694 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 SQORQ9Y6N5 450 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 SIP14410 1827 aa15.65■□□□□ 0.1
TTC39A-216ENST00000530004 TIMP1P01033 207 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 PIGRP01833 764 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 EDN1P05305 212 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 ADRB2P07550 413 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 GHRP10912 638 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 FECHP22830 423 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 ITGB8P26012 769 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 CYP2C18P33260 490 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 CCL23P55773 120 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 SNRNP35Q16560 246 aaKnown RBP15.64■□□□□ 0.1
TTC39A-216ENST00000530004 EXOC3L4Q17RC7 722 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 TSR1Q2NL82 804 aaKnown RBP15.64■□□□□ 0.1
TTC39A-216ENST00000530004 CBWD2Q8IUF1 395 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 C7orf61Q8IZ16 206 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 DNAJC7Q99615 494 aa15.64■□□□□ 0.1
TTC39A-216ENST00000530004 NOC2LQ9Y3T9 749 aaKnown RBP15.64■□□□□ 0.1
TTC39A-216ENST00000530004 SOWAHDA6NJG2 315 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 EVI5O60447 810 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 RPS6KA5O75582 802 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 PRKCBP05771 671 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 RAG1P15918 1043 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 FGFR4P22455 802 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 FMO5P49326 533 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 VAMP7P51809 220 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 LPIN1Q14693 890 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 GPNMBQ14956 572 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 PCBP1Q15365 356 aaKnown RBP eCLIP15.64■□□□□ 0.09
TTC39A-216ENST00000530004 FAM187BQ17R55 369 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 E4F1Q66K89 784 aaPredicted RBP15.64■□□□□ 0.09
TTC39A-216ENST00000530004 FAM228AQ86W67 206 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 GPD1LQ8N335 351 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 USP38Q8NB14 1042 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 SCLYQ96I15 445 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 PRIMPOLQ96LW4 560 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 TARS2Q9BW92 718 aaKnown RBP15.64■□□□□ 0.09
TTC39A-216ENST00000530004 AGO3Q9H9G7 860 aaKnown RBP15.64■□□□□ 0.09
TTC39A-216ENST00000530004 PRMT7Q9NVM4 692 aaPredicted RBP15.64■□□□□ 0.09
TTC39A-216ENST00000530004 PRKAG2Q9UGJ0 569 aa15.64■□□□□ 0.09
TTC39A-216ENST00000530004 GTPBP10A4D1E9 387 aaKnown RBP15.63■□□□□ 0.09
TTC39A-216ENST00000530004 USP27XA6NNY8 438 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 RBAK-RBAKDNI3L0D1 243 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 ACKR2O00590 384 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 NBNO60934 754 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 NOL4O94818 638 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 PARNO95453 639 aaKnown RBP15.63■□□□□ 0.09
TTC39A-216ENST00000530004 DLG4P78352 724 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 APBA1Q02410 837 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 AMHR2Q16671 573 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 CBWD6Q4V339 395 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 CBWD3Q5JTY5 395 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 CBWD5Q5RIA9 395 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 GBP6Q6ZN66 633 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 TSHZ1Q6ZSZ6 1077 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 CACNA2D4Q7Z3S7 1137 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 FBXL18Q96ME1 805 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 MRPL4Q9BYD3 311 aaKnown RBP15.63■□□□□ 0.09
TTC39A-216ENST00000530004 EDEM3Q9BZQ6 932 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 GCNT4Q9P109 453 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
TTC39A-216ENST00000530004 ERLIN2O94905 339 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 SLC9A1P19634 815 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 PON1P27169 355 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 SLFN12LQ6IEE8 588 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 CYP26C1Q6V0L0 522 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ZPBP2Q6X784 338 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 CATSPER4Q7RTX7 472 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 TMTC1Q8IUR5 882 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 CCAR2Q8N163 923 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 PLEKHO2Q8TD55 490 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 DPF3Q92784 378 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ZBTB45Q96K62 511 aaPredicted RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 FAM213AQ9BRX8 229 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 TRMT1Q9NXH9 659 aaKnown RBP15.62■□□□□ 0.09
TTC39A-216ENST00000530004 CEP72Q9P209 647 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ANKFY1Q9P2R3 1169 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 PADI3Q9ULW8 664 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 ST3GAL5Q9UNP4 418 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 TTLL13PA6NNM8 815 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 GPR182O15218 404 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 B4GALT5O43286 388 aa15.62■□□□□ 0.09
TTC39A-216ENST00000530004 EXTL3O43909 919 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms