RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 BRSK2Q8IWQ3 736 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 BAP1Q92560 729 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 VTI1AQ96AJ9 217 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 POP1Q99575 1024 aaKnown RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.48
PACS1-209ENST00000529757 NUCKS1Q9H1E3 243 aaKnown RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 CDHR5Q9HBB8 845 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 SIX2Q9NPC8 291 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 NLRC4Q9NPP4 1024 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 TOPORSQ9NS56 1045 aaPredicted RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 FBXL5Q9UKA1 691 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 GRIN2DO15399 1336 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 ZNF500O60304 480 aaPredicted RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 RPLP2P05387 115 aaKnown RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 MCF2P10911 925 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 UCHL3P15374 230 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 CRYBB1P53674 252 aaPredicted RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 CLDN10P78369 228 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 NCBP1Q09161 790 aaKnown RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 EPC2Q52LR7 807 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 PDXDC1Q6P996 788 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 CATSPER4Q7RTX7 472 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 RSPH3Q86UC2 560 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 EHBP1Q8NDI1 1231 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 PDE11AQ9HCR9 933 aa18.03■□□□□ 0.48
PACS1-209ENST00000529757 CPSF3Q9UKF6 684 aaKnown RBP18.03■□□□□ 0.48
PACS1-209ENST00000529757 TRIP12Q14669 1992 aaPredicted RBP18.02■□□□□ 0.48
PACS1-209ENST00000529757 LRRC53A6NM62 1247 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 FGFR4P22455 802 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 TNFSF9P41273 254 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 ITGA7Q13683 1181 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 SNX17Q15036 470 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 MEA1Q16626 185 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 SERINC5Q86VE9 423 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 THNSL1Q8IYQ7 743 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 C17orf53Q8N3J3 647 aaPredicted RBP18.02■□□□□ 0.47
PACS1-209ENST00000529757 ARRDC4Q8NCT1 418 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 GLT1D1Q96MS3 346 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 PLAGL2Q9UPG8 496 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 DAAM1Q9Y4D1 1078 aa18.02■□□□□ 0.47
PACS1-209ENST00000529757 A0A1B0GUA9 196 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 SOWAHDA6NJG2 315 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 M0QZ92 97 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 TNNI1P19237 187 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 HNRNPH3P31942 346 aaKnown RBP18.01■□□□□ 0.47
PACS1-209ENST00000529757 WNT7BP56706 349 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 MRPS6P82932 125 aaKnown RBP18.01■□□□□ 0.47
PACS1-209ENST00000529757 PTPN11Q06124 597 aaPredicted RBP18.01■□□□□ 0.47
PACS1-209ENST00000529757 SURF1Q15526 300 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 WDR59Q6PJI9 974 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 LMO3Q8TAP4 145 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 ADPGKQ9BRR6 497 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 COQ4Q9Y3A0 265 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 FHOD1Q9Y613 1164 aa18.01■□□□□ 0.47
PACS1-209ENST00000529757 PTGISQ16647 500 aa18■□□□□ 0.47
PACS1-209ENST00000529757 KYAT1Q16773 422 aa18■□□□□ 0.47
PACS1-209ENST00000529757 SLC9C1Q4G0N8 1177 aa18■□□□□ 0.47
PACS1-209ENST00000529757 SV2AQ7L0J3 742 aa18■□□□□ 0.47
PACS1-209ENST00000529757 APBB1IPQ7Z5R6 666 aaPredicted RBP18■□□□□ 0.47
PACS1-209ENST00000529757 SYN2Q92777 582 aaPredicted RBP18■□□□□ 0.47
PACS1-209ENST00000529757 CELF4Q9BZC1 486 aaKnown RBP18■□□□□ 0.47
PACS1-209ENST00000529757 UNC93B1Q9H1C4 597 aa18■□□□□ 0.47
PACS1-209ENST00000529757 APEX2Q9UBZ4 518 aa18■□□□□ 0.47
PACS1-209ENST00000529757 MYO6Q9UM54 1294 aa18■□□□□ 0.47
PACS1-209ENST00000529757 FRMPD3Q5JV73 1810 aa18■□□□□ 0.47
PACS1-209ENST00000529757 CLTAP09496 248 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 RFX1P22670 979 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 CDK17Q00537 523 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 DCAF4L1Q3SXM0 396 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 IQCEQ6IPM2 695 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 C15orf39Q6ZRI6 1047 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 RPAINQ86UA6 219 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 CEP120Q8N960 986 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 FBXL13Q8NEE6 735 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 TMEM40Q8WWA1 233 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 ZNF516Q92618 1163 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 SPAG5Q96R06 1193 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 TRPV2Q9Y5S1 764 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 AXLP30530 894 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 HOXA11P31270 313 aaPredicted RBP17.99■□□□□ 0.47
PACS1-209ENST00000529757 AP3M2P53677 418 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 OSTNP61366 133 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 POU5F1Q01860 360 aaKnown RBP17.99■□□□□ 0.47
PACS1-209ENST00000529757 ENOX2Q16206 610 aaKnown RBP17.99■□□□□ 0.47
PACS1-209ENST00000529757 E4F1Q66K89 784 aaPredicted RBP17.99■□□□□ 0.47
PACS1-209ENST00000529757 LMBRD2Q68DH5 695 aaPredicted RBP17.99■□□□□ 0.47
PACS1-209ENST00000529757 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 GJB7Q6PEY0 223 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 RAD9BQ6WBX8 426 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 WDR49Q8IV35 697 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 TAS1R2Q8TE23 839 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 CHP1Q99653 195 aa17.99■□□□□ 0.47
PACS1-209ENST00000529757 RPF1Q9H9Y2 349 aaKnown RBP17.99■□□□□ 0.47
PACS1-209ENST00000529757 KCND1Q9NSA2 647 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms