RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	SRBD1	Q8N5C6	995 aa	Known RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	SMG8	Q8ND04	991 aa	Known RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	DEFB124	Q8NES8	71 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	SLC7A14	Q8TBB6	771 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	IRF7	Q92985	503 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	TRMT61B	Q9BVS5	477 aa	Known RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	AVEN	Q9NQS1	362 aa	Predicted RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	MRPS23	Q9Y3D9	190 aa	Known RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	CCDC163	A0A0D9SF12	145 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	EXTL3	O43909	919 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	PLEKHA8P1	O95397	391 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	OAT	P04181	439 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	PRB1	P04280	392 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	PDE1A	P54750	535 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	MLLT6	P55198	1093 aa	Predicted RBP	13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	CREM	Q03060	361 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	IMMT	Q16891	758 aa	Known RBP	13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	PKN3	Q6P5Z2	889 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	TXNDC11	Q6PKC3	985 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	GSTCD	Q8NEC7	633 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	LNX1	Q8TBB1	728 aa	Predicted RBP	13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	FAM167A	Q96KS9	214 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	ZFP42	Q96MM3	310 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	IGSF5	Q9NSI5	407 aa		13.22	□□□□□ -0.29
PSMD13-209	ENST00000529372	TEX15	Q9BXT5	2789 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	PDCD11	Q14690	1871 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	hCG_1642624	A0A1W2PR95	340 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	ARL5C	A6NH57	179 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	IPO5	O00410	1097 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	IFIT3	O14879	490 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	AKAP3	O75969	853 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	RHO	P08100	348 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	GDI1	P31150	447 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	SREBF1	P36956	1147 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	SCNN1G	P51170	649 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	MFAP1	P55081	439 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	CCIN	Q13939	588 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	LRRC32	Q14392	662 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	UGCG	Q16739	394 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	PRSS36	Q5K4E3	855 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	LARP1B	Q659C4	914 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	TYW1B	Q6NUM6	668 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	CATSPER4	Q7RTX7	472 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	KSR1	Q8IVT5	923 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	CMTR1	Q8N1G2	835 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	CRYGN	Q8WXF5	182 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	PIK3R5	Q8WYR1	880 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	RABGGTA	Q92696	567 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	ASB16	Q96NS5	453 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	GAD1	Q99259	594 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	MAP3K14	Q99558	947 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	DSCC1	Q9BVC3	393 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	IFT122	Q9HBG6	1241 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	SEC63	Q9UGP8	760 aa	Known RBP	13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	ADAM28	Q9UKQ2	775 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	PCDHB15	Q9Y5E8	787 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	PCDHA10	Q9Y5I2	948 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	NUP205	Q92621	2012 aa		13.21	□□□□□ -0.29
PSMD13-209	ENST00000529372	VWA8	A3KMH1	1905 aa		13.21	□□□□□ -0.3
PSMD13-209	ENST00000529372	TDRD15	B5MCY1	1934 aa	Known RBP	13.21	□□□□□ -0.3
PSMD13-209	ENST00000529372	ABCA7	Q8IZY2	2146 aa		13.21	□□□□□ -0.3
PSMD13-209	ENST00000529372	BCLAF3	A2AJT9	711 aa	Known RBP	13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	PSAP	P07602	524 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	PLA2G2A	P14555	144 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	PSMC3	P17980	439 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	MLH1	P40692	756 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	SOX9	P48436	509 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	FGD1	P98174	961 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	PRKCE	Q02156	737 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	SCAP	Q12770	1279 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	ZNF410	Q86VK4	478 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	TCEAL4	Q96EI5	215 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	ZSWIM3	Q96MP5	696 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	COLEC11	Q9BWP8	271 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	ANO3	Q9BYT9	981 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	ZFP14	Q9HCL3	533 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	CACNG4	Q9UBN1	327 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	DACH1	Q9UI36	760 aa		13.2	□□□□□ -0.3
PSMD13-209	ENST00000529372	STBD1	O95210	358 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	CAVIN2	O95810	425 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	SDS	P20132	328 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	CCR2	P41597	374 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	ANTXR2	P58335	489 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	CDC42EP1	Q00587	391 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	UVSSA	Q2YD98	709 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	DGKK	Q5KSL6	1271 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	PLA2G4D	Q86XP0	818 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	PAAF1	Q9BRP4	392 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	INO80B	Q9C086	356 aa	Predicted RBP	13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	MINDY3	Q9H8M7	445 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	TMEM9B	Q9NQ34	198 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	FOXD4L1	Q9NU39	408 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	TAF6L	Q9Y6J9	622 aa		13.19	□□□□□ -0.3
PSMD13-209	ENST00000529372	SPAAR	A0A1B0GVQ0	90 aa		13.18	□□□□□ -0.3
PSMD13-209	ENST00000529372	TMEM150B	A6NC51	233 aa		13.18	□□□□□ -0.3
PSMD13-209	ENST00000529372	EIF4E1B	A6NMX2	242 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms