RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 FAM84AQ96KN4 292 aa26.9■■□□□ 1.9
LDLRAD3-203ENST00000528989 PES1O00541 588 aaKnown RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 KIAA0391O15091 583 aaKnown RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 MEFVO15553 781 aaPredicted RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 LDHAP00338 332 aaKnown RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 TRIM49P0CI25 452 aa26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 TRIM49CP0CI26 452 aa26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 STAG3L1P0CL83 205 aa26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 CYP24A1Q07973 514 aa26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 TCERG1LQ5VWI1 586 aa26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 MFSD14AQ96MC6 490 aa26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 NXF3Q9H4D5 531 aaKnown RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 METTL14Q9HCE5 456 aaKnown RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 RBAKQ9NYW8 714 aaPredicted RBP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.89■■□□□ 1.9
LDLRAD3-203ENST00000528989 BFSP1Q12934 665 aa26.89■■□□□ 1.89
LDLRAD3-203ENST00000528989 ANKRD20A12PQ8NF67 263 aa26.89■■□□□ 1.89
LDLRAD3-203ENST00000528989 SLC35C1Q96A29 364 aa26.89■■□□□ 1.89
LDLRAD3-203ENST00000528989 TRIM6Q9C030 488 aaPredicted RBP26.89■■□□□ 1.89
LDLRAD3-203ENST00000528989 KIAA1586Q9HCI6 787 aa26.89■■□□□ 1.89
LDLRAD3-203ENST00000528989 PDE11AQ9HCR9 933 aa26.89■■□□□ 1.89
LDLRAD3-203ENST00000528989 ADCY5O95622 1261 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 VAMP7P51809 220 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 ENOX2Q16206 610 aaKnown RBP26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 C1orf220Q5T0J3 134 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 FAM212AQ96EL1 285 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 CXCL16Q9H2A7 254 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 RNF39Q9H2S5 420 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 CHST12Q9NRB3 414 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 SNTG2Q9NY99 539 aa26.88■■□□□ 1.89
LDLRAD3-203ENST00000528989 A0A1B0GTH6 734 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 MAPK13O15264 365 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 CXCL8P10145 99 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 ZSCAN20P17040 1043 aaPredicted RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 NR1I3Q14994 352 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 MAN2A1Q16706 1144 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 TCTN1Q2MV58 587 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 VWA3BQ502W6 1294 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 INTS8Q75QN2 995 aaKnown RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 DEFB128Q7Z7B8 93 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 RTN4RL1Q86UN2 441 aaPredicted RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 DBF4BQ8NFT6 615 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 PARD3BQ8TEW8 1205 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 ADAM2Q99965 735 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 NDST4Q9H3R1 872 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 MMRN2Q9H8L6 949 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 CCDC85CA6NKD9 419 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 DLATP10515 647 aaKnown RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 KRT13P13646 458 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 AKAP5P24588 427 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 KCNH2Q12809 1159 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 DSC3Q14574 896 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 DCAF4L1Q3SXM0 396 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 SMG8Q8ND04 991 aaKnown RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 APOL6Q9BWW8 343 aa26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 RTN4Q9NQC3 1192 aaKnown RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 TOPORSQ9NS56 1045 aaPredicted RBP26.87■■□□□ 1.89
LDLRAD3-203ENST00000528989 IBSPP21815 317 aaPredicted RBP26.86■■□□□ 1.89
LDLRAD3-203ENST00000528989 ZNF75DP51815 510 aa26.86■■□□□ 1.89
LDLRAD3-203ENST00000528989 LMBRD2Q68DH5 695 aaPredicted RBP26.86■■□□□ 1.89
LDLRAD3-203ENST00000528989 RNF19AQ9NV58 838 aa26.86■■□□□ 1.89
LDLRAD3-203ENST00000528989 IPPQ9Y573 584 aa26.86■■□□□ 1.89
LDLRAD3-203ENST00000528989 PCDHB2Q9Y5E7 798 aa26.86■■□□□ 1.89
LDLRAD3-203ENST00000528989 SLC10A6Q3KNW5 377 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 PLEKHG4Q58EX7 1191 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 VWCEQ96DN2 955 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 FAM105AQ9NUU6 356 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 LRRIQ3A6PVS8 624 aaPredicted RBP26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 MEIS3P2A8K0S8 358 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 TIMP1P01033 207 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 CLTAP09496 248 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 GRM5P41594 1212 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 PPP3CAQ08209 521 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 BRSK2Q8IWQ3 736 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 ACAP3Q96P50 834 aa26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 RPF1Q9H9Y2 349 aaKnown RBP26.85■■□□□ 1.89
LDLRAD3-203ENST00000528989 TET1Q8NFU7 2136 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 PTPRJQ12913 1337 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 KIAA0355O15063 1070 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 UBXN1Q04323 297 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 PSMD6Q15008 389 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 LINC01599Q8WXQ3 324 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 CCDC51Q96ER9 411 aa26.84■■□□□ 1.89
LDLRAD3-203ENST00000528989 LGALS16A8MUM7 142 aa26.83■■□□□ 1.89
LDLRAD3-203ENST00000528989 CBWD6Q4V339 395 aa26.83■■□□□ 1.89
LDLRAD3-203ENST00000528989 CBWD3Q5JTY5 395 aa26.83■■□□□ 1.89
LDLRAD3-203ENST00000528989 CBWD5Q5RIA9 395 aa26.83■■□□□ 1.89
LDLRAD3-203ENST00000528989 SCN5AQ14524 2016 aa26.83■■□□□ 1.89
LDLRAD3-203ENST00000528989 LACTBL1A8MY62 500 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 RAG1P15918 1043 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 GCLMP48507 274 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 FILIP1LQ4L180 1135 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 TMEM130Q8N3G9 435 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 TMC2Q8TDI7 906 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 ZNF516Q92618 1163 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 LPPQ93052 612 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 KLK14Q9P0G3 267 aa26.83■■□□□ 1.88
LDLRAD3-203ENST00000528989 AFPP02771 609 aaKnown RBP26.82■■□□□ 1.88
LDLRAD3-203ENST00000528989 CXCL10P02778 98 aa26.82■■□□□ 1.88
LDLRAD3-203ENST00000528989 MCCD1P59942 119 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms