RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PRKCBP05771 671 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 NUBP1P53384 320 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 TUSC3Q13454 348 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 HSP90AA2PQ14568 343 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 PPP2R5AQ15172 486 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 CYP26C1Q6V0L0 522 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 NOSTRINQ8IVI9 506 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 BSNDQ8WZ55 320 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 IFT74Q96LB3 600 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 PLEKHA4Q9H4M7 779 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 KCNK12Q9HB15 430 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 WDR6Q9NNW5 1121 aaKnown RBP24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 FBXL21Q9UKT6 434 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 USP20Q9Y2K6 914 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 CASTOR2A6NHX0 329 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 TTLL13PA6NNM8 815 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 THP07101 528 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 RPL17P18621 184 aaKnown RBP24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 NAMPTP43490 491 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 CEP57Q86XR8 500 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 FLCNQ8NFG4 579 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 HASPINQ8TF76 798 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 HDAC7Q8WUI4 952 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 PDZD7Q9H5P4 517 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 FNIP2Q9P278 1114 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 LRWD1Q9UFC0 647 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 PLXNA3P51805 1871 aa24.7■■□□□ 1.54
TRAPPC4-208ENST00000527680 SF3B1O75533 1304 aaKnown RBP eCLIP24.69■■□□□ 1.543e-6■■■■■ 137.9
TRAPPC4-208ENST00000527680 ACKR2O00590 384 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 TGM5O43548 720 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 CREMQ03060 361 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 ASTLQ6HA08 431 aaPredicted RBP24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 PAAF1Q9BRP4 392 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 BHMT2Q9H2M3 363 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 IGSF9Q9P2J2 1179 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 KIAA1024Q9UPX6 916 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 GDAQ9Y2T3 454 aa24.69■■□□□ 1.54
TRAPPC4-208ENST00000527680 ZMYM2Q9UBW7 1377 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 GALR2O43603 387 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 MUTP22033 750 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 TRAPPC10P48553 1259 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 FAM171A1Q5VUB5 890 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 PRSS55Q6UWB4 352 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 GPR65Q8IYL9 337 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 TMEM105Q8N8V8 129 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 NT5C3AQ9H0P0 336 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 SH2B1Q9NRF2 756 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 DENND4AQ7Z401 1863 aa24.68■■□□□ 1.54
TRAPPC4-208ENST00000527680 CLUHO75153 1309 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 MTCL1Q9Y4B5 1905 aaKnown RBP24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 STK25O00506 426 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 RECQL4O94761 1208 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 EFNA5P52803 228 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 NBR1Q14596 966 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 TTPALQ9BTX7 342 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 KIFC3Q9BVG8 833 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 RAB34Q9BZG1 259 aa24.67■■□□□ 1.54
TRAPPC4-208ENST00000527680 K7ERI5 159 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 C1RP00736 705 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 FXR2P51116 673 aaKnown RBP eCLIP24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 CLCN5P51795 746 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 ECM1Q16610 540 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 APBB1IPQ7Z5R6 666 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 KIFAP3Q92845 792 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 RHOBTB2Q9BYZ6 727 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 PRKD2Q9BZL6 878 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 DDX19AQ9NUU7 478 aaKnown RBP24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 ZDHHC7Q9NXF8 308 aa24.66■■□□□ 1.54
TRAPPC4-208ENST00000527680 CCDC169A6NNP5 214 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 PTGESO14684 152 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 N4BP1O75113 896 aaKnown RBP24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 PTGDRQ13258 359 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 PDIA5Q14554 519 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 RTP2Q5QGT7 225 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 EEF1DP3Q658K8 133 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 LILRA6Q6PI73 481 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 C4orf32Q8N8J7 132 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 SNX29Q8TEQ0 813 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 RSAD2Q8WXG1 361 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 ZNF707Q96C28 371 aaPredicted RBP24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 CCDC113Q9H0I3 377 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 CXCL16Q9H2A7 254 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 DUSP12Q9UNI6 340 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 STK24Q9Y6E0 443 aa24.65■■□□□ 1.54
TRAPPC4-208ENST00000527680 KIF4AO95239 1232 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 ELAVL2Q12926 359 aaKnown RBP24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 PSMD5Q16401 504 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 DCAF4L1Q3SXM0 396 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 ATF7IP2Q5U623 682 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 SIX5Q8N196 739 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 MYADMQ96S97 322 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 DNM3Q9UQ16 869 aa24.64■■□□□ 1.54
TRAPPC4-208ENST00000527680 ZMYND10O75800 440 aa24.63■■□□□ 1.53
TRAPPC4-208ENST00000527680 RFX1P22670 979 aa24.63■■□□□ 1.53
TRAPPC4-208ENST00000527680 NT5DC1Q5TFE4 455 aa24.63■■□□□ 1.53
TRAPPC4-208ENST00000527680 KRT79Q5XKE5 535 aa24.63■■□□□ 1.53
TRAPPC4-208ENST00000527680 GET4Q7L5D6 327 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC4-208ENST00000527680 PCDHB6Q9Y5E3 794 aa24.63■■□□□ 1.53
TRAPPC4-208ENST00000527680 NARSO43776 548 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms