RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 PDE12Q6L8Q7 609 aaKnown RBP12.29□□□□□ -0.44
CTSB-214ENST00000527243 SLC39A4Q6P5W5 647 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 ADGRD2Q7Z7M1 963 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 FAM178BQ8IXR5 827 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 RNF168Q8IYW5 571 aaPredicted RBP12.29□□□□□ -0.44
CTSB-214ENST00000527243 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 DHX58Q96C10 678 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 SPATA32Q96LK8 384 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 TRIM9Q9C026 710 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 MAGEF1Q9HAY2 307 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 TLR9Q9NR96 1032 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 OLFML3Q9NRN5 406 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 MARCH5Q9NX47 278 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 PARP2Q9UGN5 583 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 COG5Q9UP83 839 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 HPSEQ9Y251 543 aa12.29□□□□□ -0.44
CTSB-214ENST00000527243 PLXNA4Q9HCM2 1894 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 NRP1O14786 923 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 GAP43P17677 238 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 STRN3Q13033 797 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 ZC2HC1CQ53FD0 456 aaPredicted RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 APBB1IPQ7Z5R6 666 aaPredicted RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 DDX53Q86TM3 631 aaKnown RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 ATXN2LQ8WWM7 1075 aaKnown RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 STAMQ92783 540 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 HVCN1Q96D96 273 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 PPP1R10Q96QC0 940 aaKnown RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 C7orf25Q9BPX7 421 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 FGFBP2Q9BYJ0 223 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 GBP3Q9H0R5 595 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 ZBP1Q9H171 429 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 UBE2ZQ9H832 354 aaPredicted RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 NGRNQ9NPE2 291 aaKnown RBP12.28□□□□□ -0.44
CTSB-214ENST00000527243 KCNH3Q9ULD8 1083 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 STYXL1Q9Y6J8 313 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 CUL9Q8IWT3 2517 aa12.28□□□□□ -0.44
CTSB-214ENST00000527243 MYH11P35749 1972 aa12.27□□□□□ -0.44
CTSB-214ENST00000527243 XIRP2A4UGR9 3374 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 A0A0B4J269 797 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 A0A1W2PQ27 194 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 A0A1W2PQ64 194 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 A0A1W2PQD8 194 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 F8W810 466 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
CTSB-214ENST00000527243 ALDH2P05091 517 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 ADRB2P07550 413 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 ABCD1P33897 745 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTSB-214ENST00000527243 LTBRP36941 435 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 KRT17Q04695 432 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 EHHADHQ08426 723 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 KCNC3Q14003 757 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTSB-214ENST00000527243 HLA-CQ95604 372 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 PABPC5Q96DU9 382 aaKnown RBP12.27□□□□□ -0.45
CTSB-214ENST00000527243 TMEM169Q96HH4 297 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 SNX27Q96L92 541 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 ZHX3Q9H4I2 956 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 FAM13BQ9NYF5 915 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
CTSB-214ENST00000527243 FAN1Q9Y2M0 1017 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 IRAK3Q9Y616 596 aa12.27□□□□□ -0.45
CTSB-214ENST00000527243 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 HIDE1A8MVS5 230 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 ANKRD63C9JTQ0 380 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 CLDN3O15551 220 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 NCK2O43639 380 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 LILRB3O75022 631 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 CSPG5O95196 566 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 THP07101 528 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 SLFN14P0C7P3 912 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 CTSAP10619 480 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 KCNE1P15382 129 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 PFKFB1P16118 471 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 CASP5P51878 434 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 TFF2Q03403 129 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 KCNA1Q09470 495 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 COASYQ13057 564 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 ADAM15Q13444 863 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 TUSC3Q13454 348 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
CTSB-214ENST00000527243 DUSP6Q16828 381 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 SLC10A6Q3KNW5 377 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 HERC4Q5GLZ8 1057 aaPredicted RBP12.26□□□□□ -0.45
CTSB-214ENST00000527243 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 EFHBQ8N7U6 833 aa12.26□□□□□ -0.45
CTSB-214ENST00000527243 MRPL43Q8N983 215 aaKnown RBP12.26□□□□□ -0.45
CTSB-214ENST00000527243 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
CTSB-214ENST00000527243 ZMAT2Q96NC0 199 aaKnown RBP12.26□□□□□ -0.45
CTSB-214ENST00000527243 FAM193BQ96PV7 902 aaPredicted RBP12.26□□□□□ -0.45
CTSB-214ENST00000527243 ASB2Q96Q27 587 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms