RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC105Q8IYK2 499 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 PSPC1Q8WXF1 523 aaKnown RBP12.51□□□□□ -0.41
LINC01001-201ENST00000526704 CLEC4DQ8WXI8 215 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 KLC4Q9NSK0 619 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 UBIAD1Q9Y5Z9 338 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 PASKQ96RG2 1323 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 RARGP13631 454 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 SNRPFP62306 86 aaKnown RBP12.51□□□□□ -0.41
LINC01001-201ENST00000526704 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
LINC01001-201ENST00000526704 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 TNIP1Q15025 636 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 SNRNP35Q16560 246 aaKnown RBP12.51□□□□□ -0.41
LINC01001-201ENST00000526704 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 SAAL1Q96ER3 474 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 TP73O15350 636 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 DLATP10515 647 aaKnown RBP12.5□□□□□ -0.41
LINC01001-201ENST00000526704 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 MFAP3P55082 362 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 CDR2Q01850 454 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 AUHQ13825 339 aaKnown RBP12.5□□□□□ -0.41
LINC01001-201ENST00000526704 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
LINC01001-201ENST00000526704 POP1Q99575 1024 aaKnown RBP12.5□□□□□ -0.41
LINC01001-201ENST00000526704 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
LINC01001-201ENST00000526704 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 PDE6CP51160 858 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 GPC3P51654 580 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 RWDD2BP57060 319 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 PCNX4Q63HM2 1172 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 KRT39Q6A163 491 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 CROCCP2Q86T23 111 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 LRRC34Q8IZ02 419 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC197Q8NCU1 140 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 DHX38Q92620 1227 aaKnown RBP12.5□□□□□ -0.41
LINC01001-201ENST00000526704 P3H4Q92791 437 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 HVCN1Q96D96 273 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC134Q9H6E4 229 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 LRRC19Q9H756 370 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 HAUS2Q9NVX0 235 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 COQ4Q9Y3A0 265 aa12.5□□□□□ -0.41
LINC01001-201ENST00000526704 COL4A5P29400 1685 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 CLDN3O15551 220 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 ASAP2O43150 1006 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 ECEL1O95672 775 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 MTMR1Q13613 665 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 PLA2G4FQ68DD2 849 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TAS1R2Q8TE23 839 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 PARD3BQ8TEW8 1205 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 SLCO2A1Q92959 643 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC127Q96BQ5 260 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 PRMT1Q99873 361 aaKnown RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 KIFC3Q9BVG8 833 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TIPINQ9BVW5 301 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TMEM39BQ9GZU3 492 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 QTRT2Q9H974 415 aaKnown RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TMEM8AQ9HCN3 771 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 CD248Q9HCU0 757 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 INTS9Q9NV88 658 aaKnown RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 COL11A1P12107 1806 aaPredicted RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 ATP2C2O75185 946 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 GHRP10912 638 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 GHRHRQ02643 423 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC25Q86WR0 208 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 MAP4K3Q8IVH8 894 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 FUKQ8N0W3 1084 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TMEM161BQ8NDZ6 487 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 DDX23Q9BUQ8 820 aaKnown RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 CDC42EP4Q9H3Q1 356 aaKnown RBP12.49□□□□□ -0.41
LINC01001-201ENST00000526704 TBX20Q9UMR3 447 aa12.49□□□□□ -0.41
LINC01001-201ENST00000526704 CALCAP01258 141 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 KRT17Q04695 432 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC38Q502W7 563 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 ACAD10Q6JQN1 1059 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 CYB5D1Q6P9G0 228 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms