RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 AMHP03971 560 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 ADRB2P07550 413 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 CXCL8P10145 99 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 GRM5P41594 1212 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 LRRC63Q05C16 580 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 SHHQ15465 462 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 TPD52L1Q16890 204 aaPredicted RBP14.95□□□□□ -0.02
CD44-224ENST00000526669 LRSAM1Q6UWE0 723 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 ZNF598Q86UK7 904 aaKnown RBP14.95□□□□□ -0.02
CD44-224ENST00000526669 CBWD2Q8IUF1 395 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 GPD1LQ8N335 351 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 AOPEPQ8N6M6 819 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 XXYLT1Q8NBI6 393 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 HERVK_113Q902F9 699 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 GDF15Q99988 308 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 CCDC94Q9BW85 323 aaPredicted RBP14.95□□□□□ -0.02
CD44-224ENST00000526669 CGNQ9P2M7 1197 aaKnown RBP14.95□□□□□ -0.02
CD44-224ENST00000526669 RWDD2AQ9UIY3 292 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 TRIOBPQ9H2D6 2365 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 EXTL3O43909 919 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 EFCAB14O75071 495 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 FGFR1P11362 822 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 SNRPFP62306 86 aaKnown RBP14.94□□□□□ -0.02
CD44-224ENST00000526669 ADAM9Q13443 819 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 EDRF1Q3B7T1 1238 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 HSP90AA4PQ58FG1 418 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 CRELD2Q6UXH1 353 aaPredicted RBP14.94□□□□□ -0.02
CD44-224ENST00000526669 AGMOQ6ZNB7 445 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 MRPL10Q7Z7H8 261 aaKnown RBP14.94□□□□□ -0.02
CD44-224ENST00000526669 C12orf56Q8IXR9 622 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 HELQQ8TDG4 1101 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 RNPC3Q96LT9 517 aaKnown RBP14.94□□□□□ -0.02
CD44-224ENST00000526669 ACAP3Q96P50 834 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 TRAIPQ9BWF2 469 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 SRRTQ9BXP5 876 aaKnown RBP14.94□□□□□ -0.02
CD44-224ENST00000526669 TSPY26PQ9H489 355 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 RPF1Q9H9Y2 349 aaKnown RBP14.94□□□□□ -0.02
CD44-224ENST00000526669 DMAC2Q9NW81 257 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 INPP5FQ9Y2H2 1132 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 PCDHB7Q9Y5E2 793 aa14.94□□□□□ -0.02
CD44-224ENST00000526669 PLXNA4Q9HCM2 1894 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 CETN3O15182 167 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 MEFVO15553 781 aaPredicted RBP14.93□□□□□ -0.02
CD44-224ENST00000526669 ZNF623O75123 536 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 LDHAP00338 332 aaKnown RBP14.93□□□□□ -0.02
CD44-224ENST00000526669 CLTAP09496 248 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 SKIP12755 728 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 ERCC5P28715 1186 aaPredicted RBP14.93□□□□□ -0.02
CD44-224ENST00000526669 WNT7BP56706 349 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 FAM189BP81408 668 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 SPAG1Q07617 926 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 ENOX2Q16206 610 aaKnown RBP14.93□□□□□ -0.02
CD44-224ENST00000526669 NFIL3Q16649 462 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 PAN2Q504Q3 1202 aaKnown RBP14.93□□□□□ -0.02
CD44-224ENST00000526669 CLLU1OSQ5K130 101 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 LRRC55Q6ZSA7 311 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 NPAS4Q8IUM7 802 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 SLC9A9Q8IVB4 645 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 HACE1Q8IYU2 909 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 TMEM130Q8N3G9 435 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 CSGALNACT2Q8N6G5 542 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 PGBD4Q96DM1 585 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 FAM84AQ96KN4 292 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 ZFP42Q96MM3 310 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 GAD1Q99259 594 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 RSAD1Q9HA92 442 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 TMEM161AQ9NX61 479 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 CPSF3Q9UKF6 684 aaKnown RBP14.93□□□□□ -0.02
CD44-224ENST00000526669 SLC4A7Q9Y6M7 1214 aa14.93□□□□□ -0.02
CD44-224ENST00000526669 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 KIAA0391O15091 583 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 AKAP3O75969 853 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 RPL13P26373 211 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 MLH1P40692 756 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 AFF1P51825 1210 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 YARSP54577 528 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 ZNF445P59923 1031 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 FKBP3Q00688 224 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 SLC10A6Q3KNW5 377 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 GLRA4Q5JXX5 417 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 LMBRD2Q68DH5 695 aaPredicted RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 CREBRFQ8IUR6 639 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 BRSK2Q8IWQ3 736 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 ZC3H3Q8IXZ2 948 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 FAM186BQ8IYM0 893 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 SNX27Q96L92 541 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 MTIF3Q9H2K0 278 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 ELAC1Q9H777 363 aaKnown RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 CBX8Q9HC52 389 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 MIOSQ9NXC5 875 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 RBAKQ9NYW8 714 aaPredicted RBP14.92□□□□□ -0.02
CD44-224ENST00000526669 FRMD4BQ9Y2L6 1034 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 ATG2AQ2TAZ0 1938 aa14.92□□□□□ -0.02
CD44-224ENST00000526669 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 TBKBP1A7MCY6 615 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 EOMESO95936 686 aa14.91□□□□□ -0.02
CD44-224ENST00000526669 EPB41P11171 864 aaKnown RBP14.91□□□□□ -0.02
CD44-224ENST00000526669 ZNF165P49910 485 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms