RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 PRSS55Q6UWB4 352 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-210ENST00000525990 DTHD1Q6ZMT9 781 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 TRIM67Q6ZTA4 783 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 HACE1Q8IYU2 909 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 MAN1C1Q9NR34 630 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 DZANK1Q9NVP4 752 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 ADAM28Q9UKQ2 775 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 CARNS1A5YM72 827 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 CCDC169A6NNP5 214 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 H3BQV1 296 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 M0R296 226 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 LAD1O00515 517 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 RFPL2O75678 378 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 DSG1Q02413 1049 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
SSBP3-210ENST00000525990 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 PTPN21Q16825 1174 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 RILPL1Q5EBL4 403 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 RTP2Q5QGT7 225 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 ATF7IP2Q5U623 682 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 C1orf186Q6ZWK4 172 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 TMEM130Q8N3G9 435 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 KIFAP3Q92845 792 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 FAM122AQ96E09 287 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 IFT74Q96LB3 600 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 COLEC11Q9BWP8 271 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 EMILIN2Q9BXX0 1053 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 SFXN1Q9H9B4 322 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
SSBP3-210ENST00000525990 GOLGA2P5Q9HBQ8 144 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 CHST7Q9NS84 486 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 SMC3Q9UQE7 1217 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
SSBP3-210ENST00000525990 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 SLC16A4O15374 487 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-210ENST00000525990 PDGFBP01127 241 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-210ENST00000525990 MTHFRP42898 656 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 OSTNP61366 133 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 TUSC3Q13454 348 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 HSP90AA2PQ14568 343 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-210ENST00000525990 RIN2Q8WYP3 895 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-210ENST00000525990 ASIC4Q96FT7 647 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 ADPGKQ9BRR6 497 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 RAB34Q9BZG1 259 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 CDT1Q9H211 546 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 RXFP1Q9HBX9 757 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 PHLPP2Q6ZVD8 1323 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 ZMYM2Q9UBW7 1377 aa13.27□□□□□ -0.29
SSBP3-210ENST00000525990 K7ERI5 159 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ABLIM1O14639 778 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 N4BP1O75113 896 aaKnown RBP13.26□□□□□ -0.29
SSBP3-210ENST00000525990 BRD1O95696 1058 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 THP07101 528 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 EFNA5P52803 228 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 SOX4Q06945 474 aaPredicted RBP13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ZNF568Q3ZCX4 644 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 SEZ6Q53EL9 994 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 HYIQ5T013 277 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 IER5LQ5T953 404 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 LARP1BQ659C4 914 aaKnown RBP13.26□□□□□ -0.29
SSBP3-210ENST00000525990 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ZBTB33Q86T24 672 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 PPFIBP1Q86W92 1011 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 KREMEN2Q8NCW0 462 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ZBTB45Q96K62 511 aaPredicted RBP13.26□□□□□ -0.29
SSBP3-210ENST00000525990 NECTIN4Q96NY8 510 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 NOTCH4Q99466 2003 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ACO2Q99798 780 aaKnown RBP13.26□□□□□ -0.29
SSBP3-210ENST00000525990 TARS2Q9BW92 718 aaKnown RBP13.26□□□□□ -0.29
SSBP3-210ENST00000525990 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 ARHGAP28Q9P2N2 729 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 LIMD1Q9UGP4 676 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 NR2E1Q9Y466 385 aa13.26□□□□□ -0.29
SSBP3-210ENST00000525990 I3L4J1 428 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 ADAM12O43184 909 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 TGM5O43548 720 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 NR1I2O75469 434 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 TADA2AO75478 443 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 GLUD1P00367 558 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 ADH1AP07327 375 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 HARSP12081 509 aaKnown RBP13.25□□□□□ -0.29
SSBP3-210ENST00000525990 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 SIGLEC14Q08ET2 396 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 ARSHQ5FYA8 562 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
SSBP3-210ENST00000525990 TDRD5Q8NAT2 981 aaKnown RBP13.25□□□□□ -0.29
SSBP3-210ENST00000525990 C3orf58Q8NDZ4 430 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms